LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu06g03813	ATGATAACCGTATCTAAGGATGGGAGTGGAGATTATACAACCGTGGGTGAAGCTATCAGCAATGCTCCTGATTTTAGTGAGCAACCTTACAACATTCACATTTTGGGAGGCATTTATGAAGAGTACATTCTGATTCCACCAAGTAAGACTAATATTAAGCTCCTCGGTCATGGTTCAACCCGCACAATAATAATGGGTCGCCAAAATGGTTCCACCATAGACATCCGTGGAAAGGGATTCATGGCACAAAACATTGGATTTGTGAACTCAGCCGGTCTAGATGCAAGCGCTGCAGTGGCAGTTCGTAACGAGGCAACCAATAGCATATTCTTTCAATGCTCCATCCAAGGATTCCAAGACACCTTATGGGCAGTATCAGGCAGACAATTCTACAAGAACTGTGAAATCTATGGTACTGTCGATTTCATCTATGGAAATGCAGCCGCTGTATTTCAAGACTGCATGATTTACGCACGCTATCGACAGTTTGTGACATTCACCGCTCAGTCGCGCGAGAATCCAAACGAGAAGACAGGTTTCACATTCCAACGTTGTAAATTCAGCATGTCACCTGAGGATGAGAACAGAAAGTCAGAGGTGGTGCGTGCCACGTTGGGTCGTCCTTGGAGGGCATATTCGACAGTTGCTATACTGCAGTGTTACATAGATTCAATGGTGGATCCTAGAGGTTGGGAACAGATGCCGGGACAGCCGATAGATAAGGTTACTTATGTGGAGTTTAAGAATGTTGGTCCTGGTTCTAACACTGATGGTAGAGTGAATTGGCCTGGTGTTAGAGTTATTGGAAACCCAAATGAAGCACTCCCTTTCACTGCTTCCTATCTATTGGATGCTCACTCTTGGATTCCATCTACAGGTGTTCCATTTGATAGTGGACTTTAA	903	0.4452	MITVSKDGSGDYTTVGEAISNAPDFSEQPYNIHILGGIYEEYILIPPSKTNIKLLGHGSTRTIIMGRQNGSTIDIRGKGFMAQNIGFVNSAGLDASAAVAVRNEATNSIFFQCSIQGFQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMIYARYRQFVTFTAQSRENPNEKTGFTFQRCKFSMSPEDENRKSEVVRATLGRPWRAYSTVAILQCYIDSMVDPRGWEQMPGQPIDKVTYVEFKNVGPGSNTDGRVNWPGVRVIGNPNEALPFTASYLLDAHSWIPSTGVPFDSGL	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu06g03813	300	PANTHER	PECTINESTERASE	2	299	-	-
	Tsu06g03813	300	PANTHER	PECTINESTERASE	2	299	-	-
	Tsu06g03813	300	SUPERFAMILY	Pectin lyase-like	2	299	IPR011050	-
	Tsu06g03813	300	Pfam	Pectinesterase	2	284	IPR000070	GO:0030599\|GO:0042545
	Tsu06g03813	300	Gene3D	-	1	300	IPR012334	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu06g03813	Tsu-Chr6	50322757	50326903	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu06g03813	4	300	Carbohydrate Esterase	AT3G05620	42.675	2.56e-81	254

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu06g03813	K01051		-	gmx:102665195	450.669