Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03777 ATGCAAACTCTCATTGTTTCATCTTCTACTTCAAAACCAAGATTTCACCCTTTTCAAAATTCTCATtatcattctttttcttcttcaccaCTTAGACTCACCATTGATGGATTTTCATGCCCAtctttttctttgttccaaACTGTTAGAAAGTCTTCACCTTTTCTCATTTCAAATccaaaaatttcatcttttagAGTCTTTGCTGCTTCTGTTCCAGAGGCACAAAGTGATGAACCAACTCAATCTTCTGGGTTGGTTCAGTCTTTGCAGCTTGGTTTCATGTTTGCAACTTGGTATCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTCGGCTTTGCTTCGTTGGTGATTAATGTGATCTGGACTTTGAATCTTCATCCAAGACCAAACATCAGTAAGTCAAAGCTTGTAGCAATACTTCCACTGGCGCTAGCTCATACATTAGGGAACATGTTGACCAACATTAGTCTTGGCAAGGTTTCTGTTTCTTTCACTCACACCATCAAAGCTATGGAACCTTTCTTCACTGTTATTCTTTCATCCCTTCTCCTTGGTGAGATGCCAAATTTATGGGTGCTTTCTTCTCTTTTACCTATTGTTGGGGGAGTGGCACTAGCATCAATGACTGAAGTATCTTTCAATTGGATTGGATTCAGCACTGCAATGGCATCTAACCTTACAAATCAATCACGGAATGTTTTGAGCAAAAAAGTAATGGCTAATGAAGAGGATGCTTTGGACAATATCAATCTCTATTCAGTTATAACCATCGTTTCCTTTTTCCTGTTGTTACCGTTTGCTATATTTTTGGAGGGTGTCAAGTTTACTCCTTCATACCTGCAATCTGCTGCAAGTCAAGGATTGAATGTTAGAGAGCTATGCATAAGATCAGTTTTGGCTGCATTCTGCTTCCATGCATACCAGCAGGTTTCATATGGAATATTGGAGAAGGTGTCACCTGTGACACACTCGGTAGGAAATTGCGTGAAGCGTGTGGTTGTTATCGTCTCTTCTGTTATCTTCTTCCAAACTCCTGTCTCGCCTATTAATGCACTTGGAACTGCTTTTGCACTTGTTGGTGTTTTCTTGTATTCAAGAGCAAAGAGGATTAAGCCAATGCCAAAAACAAATACAGCATAA 1194 0.3727 MQTLIVSSSTSKPRFHPFQNSHYHSFSSSPLRLTIDGFSCPSFSLFQTVRKSSPFLISNPKISSFRVFAASVPEAQSDEPTQSSGLVQSLQLGFMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLVINVIWTLNLHPRPNISKSKLVAILPLALAHTLGNMLTNISLGKVSVSFTHTIKAMEPFFTVILSSLLLGEMPNLWVLSSLLPIVGGVALASMTEVSFNWIGFSTAMASNLTNQSRNVLSKKVMANEEDALDNINLYSVITIVSFFLLLPFAIFLEGVKFTPSYLQSAASQGLNVRELCIRSVLAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAFALVGVFLYSRAKRIKPMPKTNTA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03777 397 Pfam Triose-phosphate Transporter family 90 383 IPR004853 -
Tsu06g03777 397 PANTHER SOLUTE CARRIER FAMILY 35 35 390 - -
Tsu06g03777 397 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 35 390 - -
Tsu06g03777 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 276 387 - -
Tsu06g03777 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 132 227 - -
Tsu06g03777 397 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 90 393 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03777 Tsu-Chr6 50028908 50033324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03777 14 394 Antiporters AT5G33320 59.694 2.00e-151 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03777 K15283 - gmx:100819280 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03777 06 50028908 50033324 Tsu06g03777 06 50028908 50033324 ECH