Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03757 ATGGAACGTATTTCGGAAAAACGATTTCCTCTCAGTGCAAAAGATTACAAGTTATATGAAGAGGTTGGGGAAGGTGTTAGTGCCTCGGTATACCGGGCTCTCTGCATTCCACTCAATGAGATTGTTGCCATCAAAGTTCTTGATCTCGAGAAATGCAATAACGATCTGGATGGAATTCGAAGAGAGGTACAGACCATGAGCTTGATTGATCATCCAAATCTTTTACGGGCACATTGCTCTTTTACCGCTGGACACAGTCTTTGGGTTGTGATGCCATACATGTCTGGGGGCTCTTGCCTTCATATAATGAAATCTTCCTTTCCTGAGGGTTTTGATGAACCTGTTATTGCAACTGTATTGCGCGAGGTTCTCAAAGCTCTTGTTTATCTCCATGCCCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGCTTGATTCTAATGGTGACGTCAAAATGGCTGACTTTGGAGTGTCTGCGTGTATGTTTGATACTGGAGACAGGCAACGTTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCGTTTTCCAAGTATCCGCCGATGAAAGTGTTGCTTATGACTTTGCAGAATGCTCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTAGTTGCCACCTGCTTAGTCAAAGACCCAAAGAAGCGTCCAAGTTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACATGCACGTCCCACCGAATATCTAAGTCGCACCATTCTCGATGGCCTTGCTCCATTAGGAGATCGTTTTAGAACGCTGAAGGCTAAAGAGGCAGATTTATTGATGCAGAACAAGGCTCTTTATGAGGATATGGAGCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAACTTGGAAGATTTAAAAAGTCAAGCCGCTCTTATTCAAGATGCAGACATGTCAAATGCAGAAGAGCCAGATACAGATAAGAAGACAAAAGACATATCAAATGACTTAAAGGTTCCAACAGAGGAGCCATCTGCTTCTAATCATTCAGATGGTACATCCACACAGGACAAGGAGGATGGATTCAATAATCTTCAGGATTTGGAAAGTTCACTTGCTTCATTTCCTATTAAACCTCTTCAAGCACTCAAAGGTTGTTTTGATGTCGGTGATGATGAAGTCAATAATACTAGTCCAACAGATTTGGATCACAGTTATGGAAGAATTGATAGTGAAAGTTCCGGGCCAAGTAATTTGTCGCCTAAAAACGCTTTAACTCAGCCTAAGAAGTTTTTGAGTGGCTCTTTACAACATGATAATGCTGCCAAGAAGGCTGCCGATGGGGACAGGGATTATCTACAAACAAAATATCCTTCTGAGCGGAATCACAGTGGTCCATTGCTATATCGGCAAAGGAGAGATGTCAACAACTTTCCATCGgTTGATGACACATCAGAAGGAGCAATTGTCCAGCGTAGGGGGAGGTTTAAGGTCACATCAGCAGATCCCAGTTCAATGGGTCTTTCAAACAACACTTCTGTCCCAGTTGCTGGAAGTCCTCCTCCTAGTAGTCCCCCAAATCAGAACTCAATGGGCACTTCTATTCTCCCATCACTGCAGTGCATCTTACAACAGAACGGCTTGCAGAGGGAAGAaattattaaattgataaaGTATGCAGAGCAATCTTATGGTATTTCCTCTCGTCTTTATGTGTGCGAATCTTTGTGTTTGTTGGTGTATATATTTGTTTACTGA 1872 0.4151 MERISEKRFPLSAKDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAHCSFTAGHSLWVVMPYMSGGSCLHIMKSSFPEGFDEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILLDSNGDVKMADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARPTEYLSRTILDGLAPLGDRFRTLKAKEADLLMQNKALYEDMEQLSQKEYIRGISAWNFNLEDLKSQAALIQDADMSNAEEPDTDKKTKDISNDLKVPTEEPSASNHSDGTSTQDKEDGFNNLQDLESSLASFPIKPLQALKGCFDVGDDEVNNTSPTDLDHSYGRIDSESSGPSNLSPKNALTQPKKFLSGSLQHDNAAKKAADGDRDYLQTKYPSERNHSGPLLYRQRRDVNNFPSVDDTSEGAIVQRRGRFKVTSADPSSMGLSNNTSVPVAGSPPPSSPPNQNSMGTSILPSLQCILQQNGLQREEIIKLIKYAEQSYGISSRLYVCESLCLLVYIFVY 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03757 623 MobiDBLite consensus disorder prediction 432 464 - -
Tsu06g03757 623 MobiDBLite consensus disorder prediction 540 555 - -
Tsu06g03757 623 MobiDBLite consensus disorder prediction 356 400 - -
Tsu06g03757 623 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Tsu06g03757 623 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03757 623 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Tsu06g03757 623 MobiDBLite consensus disorder prediction 359 376 - -
Tsu06g03757 623 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03757 623 MobiDBLite consensus disorder prediction 378 400 - -
Tsu06g03757 623 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 601 - -
Tsu06g03757 623 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Tsu06g03757 623 CDD STKc_OSR1_SPAK 14 277 - -
Tsu06g03757 623 Gene3D Transferase(Phosphotransferase) domain 1 97 295 - -
Tsu06g03757 623 MobiDBLite consensus disorder prediction 538 569 - -
Tsu06g03757 623 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 601 - -
Tsu06g03757 623 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03757 Tsu-Chr6 49830478 49838864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03757 1 601 MAP Kinase Kinase Kinase Kinase AT5G14720 67.150 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Tsu06g03757 Pkinase 9.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03757 K08835 - gmx:100778837 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03757 06 49830478 49838864 Tsu06g03757 06 49830478 49838864 ECH