Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03746 ATGGGTACCTCTTCTGAAAACGCCGCCGGTGGTGGCCGAGGCACCGCCGTCCCCAAAGAAGTTGACTACGCGAACTACTTCTGCACCTATTCCTTTCTCTACCATCAAAAAGAGATGCTCTCAGACCGTGTTCGAATGGACGCTTACTTCAATGCCGTTTTTGAAAACAAACATCACTTTAAGGATAAGgttgttttggaTGTGGGAGCTGGAAGTGGTATTCTTGCTATATGGTCAGCTCAGGCAGGTGCTAAGAAGGTTTATGCAGTTGAAGCTACTAAGATGTCAGAACACGCCCGTGCACTTGTTAAAGCAAATAATCTTGAGCAAGTAGTCGATGTTATTGAGGGATCTGTTGAGGATGTTACATTGCCAGAGAAAGTTGATGTCATCATATCTGAATGGATGGGTTATTTTCTTCTGCGAGAATCTATGTTTGATTCAGTTATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGAGTAATgTATCCTAGTCATGCTCGTATGTGGATGGCACCTATCAAAACTGGGATAGTAGAACAAAAATTGGGTGATTACCAGTCAGCTATGGGTGATTGGCACAACTTCGTCGACGAAACAAAAGCTTTCTATGGTGTTGATATGAGCACTTTGGCGAAGCCTTTTGCAGAGGAGCAAAGGAAGTACTATCTACAGACATCGTTGTGGAACAATCTTCATCCACATCAAGTCATAGGAACTGCTGGTATAATTAAGGAAATTGACTGTTTGACTGCCACAGTTGCAGACATAGAGAAAGTTAGATCCAAATTTTCTTTGTCAATAACCATGGAAAACACAAAATTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTCCGGGGACGAAGTGAGGATCCAGCTGAACATGAGATCGAGTTAACTACTGCTCCTAGTGTAGATTACTGTACACACTGGGGCCAGCAGGTTTTCCTCTTAAATCCTCCTACACATGTTAGTGAAGGTGATGAATTAAGTGTTAATTTTCTAATGAGTCGCTCGAAGGGGAACCATCGTTTGATGGAGGTTGAGCTTGGATGTGAGATTCAAAAGCATTCCTGCAAGCTTGTTGCACCTTTCAAAAATAAGTACTACATCGAATGA 1125 0.424 MGTSSENAAGGGRGTAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLEQVVDVIEGSVEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIKTGIVEQKLGDYQSAMGDWHNFVDETKAFYGVDMSTLAKPFAEEQRKYYLQTSLWNNLHPHQVIGTAGIIKEIDCLTATVADIEKVRSKFSLSITMENTKLCGFGGWFDVHFRGRSEDPAEHEIELTTAPSVDYCTHWGQQVFLLNPPTHVSEGDELSVNFLMSRSKGNHRLMEVELGCEIQKHSCKLVAPFKNKYYIE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03746 374 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 134 - -
Tsu06g03746 374 Gene3D - 167 374 - -
Tsu06g03746 374 Gene3D Vaccinia Virus protein VP39 20 165 IPR029063 -
Tsu06g03746 374 CDD AdoMet_MTases 65 164 - -
Tsu06g03746 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 11 358 - -
Tsu06g03746 374 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 351 IPR025799 GO:0016274|GO:0018216
Tsu06g03746 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 11 358 IPR025799 GO:0016274|GO:0018216
Tsu06g03746 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03746 Tsu-Chr6 49682542 49688385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03746 25 335 C2H2 Transcription Factor Family AT3G12270 32.530 3.04e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03746 K11434 - gmx:100795134 667.151