Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g03745 | atggaaaagaaaaaagttacgGTACCTCTTGTTTGTCACGGTCACTCTCGTCCAGTTGTTGATCTTTTTTACAGTCCTGTTACTCCCGATGGTTTCTTCCTTATAAGCGCAAGCAAAGATGCTAGTCCTATGCTGAGGAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCAGTTTGGAGTTGTTGCTTGGATGCTAATGCTTTGCGGGCAGCAACTGCTTCGGCTGATTTCTCAACCAAAGTTTGGGATGCATTAACGGGAGACGAGTTACATTCTTTTGAGCATAAGCACATTGTTAGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTGCTCACTGGGGGAGCAGAGAAAATTCTCCGAATTTATGATTTGAATCGGCCTGATGCACCACCCAAAGAAGTGGATAAATCCCCTGGTTCAGTCAGGAGTGTTGCATGGCTTCATAGTGACCAGACAATATTGAGTTCATGTACTGATATGGGAGGAGTCAGGCTATGGGATGTAAGAACTGGTAACATAGTTCAGACACTTGACACCAAGTCGCCTATGACTAGTGCTGAAGTAAGTCAGGATGGTCGTTATATTACAACCGCTGATGGTTCTACTGTTAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGATATGCCATGCAATGTGGAATCAGCTTCATTGGAGCCCAAGTTTGGGAACAAGTTTGTTGCTGGGGGAGAAGACTTGTGGGTTCATGTGTTTGATTTCCATACTGGCAATGAGATTGCATGCAACAAAGGCCATCATGGTCCTGTTCACTGTGTTCGATTCTCTCCTGGTGGAGAGTCATATGCATCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGTCCATTGACTCATGATGAATCAGAGGGTTTATCACCAAATGGATCCCTTGAAAAGGAGAAGGCAAGTGCAGAGGAGGATATTTCACGCAGGATTGAGGGTTTTCATATTGCAGAGGAGGCAAAGTCCAAAGGAAAGGAAGAGGCAGGGGAGGAATTATGA | 1059 | 0.44 | MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADFSTKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPKEVDKSPGSVRSVAWLHSDQTILSSCTDMGGVRLWDVRTGNIVQTLDTKSPMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCNVESASLEPKFGNKFVAGGEDLWVHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDESEGLSPNGSLEKEKASAEEDISRRIEGFHIAEEAKSKGKEEAGEEL | 352 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g03745 | 352 | Gene3D | - | 9 | 324 | IPR015943 | GO:0005515 | |
Tsu06g03745 | 352 | MobiDBLite | consensus disorder prediction | 302 | 325 | - | - | |
Tsu06g03745 | 352 | PANTHER | OS02G0205400 PROTEIN | 1 | 344 | - | - | |
Tsu06g03745 | 352 | SUPERFAMILY | WD40 repeat-like | 4 | 300 | IPR036322 | GO:0005515 | |
Tsu06g03745 | 352 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 266 | 298 | - | - | |
Tsu06g03745 | 352 | Pfam | WD domain, G-beta repeat | 94 | 130 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | Pfam | WD domain, G-beta repeat | 54 | 89 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | Pfam | WD domain, G-beta repeat | 265 | 297 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 344 | - | - | |
Tsu06g03745 | 352 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 266 | 298 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 57 | 98 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | CDD | WD40 | 14 | 298 | - | - | |
Tsu06g03745 | 352 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 98 | 132 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | SMART | WD40_4 | 177 | 214 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | SMART | WD40_4 | 92 | 130 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | SMART | WD40_4 | 259 | 298 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | SMART | WD40_4 | 134 | 174 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | SMART | WD40_4 | 50 | 89 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | SMART | WD40_4 | 5 | 47 | IPR001680 | GO:0005515 | |
Tsu06g03745 | 352 | SMART | WD40_4 | 217 | 256 | IPR001680 | GO:0005515 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g03745 | 9 | 296 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 29.448 | 3.99e-40 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g03745 | K13137 | - | gmx:100818422 | 637.876 |