Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03737 ATGGGTGGTGGAGGTACACTCGTTGATGGCATTCGTCGATTCTTTCATCGCCGCACTTCTATTAACCCACTTCATCACCACAACAAAAATGATCTTAATTCAAACAACCTTAACAATGctaacatcaacaacaaccccTCTTCATTGAATCTTCTCAAAGTTCCTATACGTTCTCATTTCATACCTTCTTCTATGGATCGAAACAAAAAGGGTGCAGGAGAAGTAGAATTTTTTACCGAGTATGGAGAGGCAAATCGGTACCAAGTCCAAGAAGTTGTTGGGAAAGGAAGTTACGGTGTTGTTGTTTCTGCCGTGGATACTATTACTGGGGAAAAGGTTGCAATTAAGAAAATCAATGATGTTTTTGAGCATGTATCGGATGCCACACGGATACTAAGAGAAATTAAACTTCTTCGTTTGCTACGACATCCTGATATAGTAGAAATTAAACATATAATGCTTCCACCTTCACGAAGAGAGTTCAAAGATGTCTATGTTGTGTTTGAGTTAATGGAATCGGACCTTCATCAAGTAATTAAAGCAAATGATGATCTTACTCCCGAGCACTATCAATTTTTCTTGTACCAGCTTCTTCGGGGCCTGAAATATACACATACAGCCAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTAGCTAATGCTGattgcaaattaaaaatatgtgatTTTGGGCTTGCTCGAGTTTCATTTAATGATGCTCCGTCAGCTATATTCTGGACTGACTACGTTGCGACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACTCCAGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTAGTGGCAAGCCATTGTTTCCCGGGAAGAATGTGGTGCACCAATTGGATCTCATGACTGACTTGCTTGGTACTCCTCCTGCTGAATCCATTTCGAGGaTTCGAAATGAGAAGGCTAGAAGGTACCTTAGTAGCATGAGGAAAAAGCAACCAGTTCCATTCtccaaaaaatttccaaatgtAGATCCATTGGCTCTTAATTTGCTGGAGCGCTTACTTGCTTTTGATCCTAAAGACCGTCCATCAGCTGAAGAGGCACTATCTGATCCTTACTTTCATGGGTTGTCAAATGTGGAACGTGAACCGTCCACTCAACCAATTTCGAAGCTCGAGTTTGAATTTGAGAGAAGAAAATTGACCAAAGATGATGTTCGAGAACTGATATATCGAGAGATCTTAGAGTATCATCCCCAGATGCTCCAAGAATATCTTAGTGGTGGAGATCAAACAAGCTTCATGTATCCGAGTGGGGTTGATCGGTTTAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGGAAAGGTGAAAAAGGCTCTCCATTGTTGAGACAACATGCCTCCTTACCTAGagAGCGGGTTCATGCTCCGAAAGatgaaaataatcaaaataatgaTTGTGAAAACCCAACCGGATCAAATCTTCATAGCCCATCAGGTGTAACAAATTCTGGTGATGCAAATGCACAAAACGGACCATCAAACAACACGTCACGTTGTCTGTTGAAGAGTGCCAGCATTAGCGGTTCAAAATGTATAGATGTCAAAAAAAGTAAAGATCCTGAGGAGGAACCAATTCCAGAGGTCAATGATGAAGCGGTGGACGAGTTGTCGGAGAAGGTTGCTGCTCTCCTCGCTTAG 1716 0.3969 MGGGGTLVDGIRRFFHRRTSINPLHHHNKNDLNSNNLNNANINNNPSSLNLLKVPIRSHFIPSSMDRNKKGAGEVEFFTEYGEANRYQVQEVVGKGSYGVVVSAVDTITGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYTHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFSKKFPNVDPLALNLLERLLAFDPKDRPSAEEALSDPYFHGLSNVEREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLSGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGEKGSPLLRQHASLPRERVHAPKDENNQNNDCENPTGSNLHSPSGVTNSGDANAQNGPSNNTSRCLLKSASISGSKCIDVKKSKDPEEEPIPEVNDEAVDELSEKVAALLA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03737 571 MobiDBLite consensus disorder prediction 478 559 - -
Tsu06g03737 571 CDD STKc_TDY_MAPK 86 423 - -
Tsu06g03737 571 Pfam Protein kinase domain 87 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03737 571 ProSitePatterns MAP kinase signature. 122 225 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu06g03737 571 ProSiteProfiles Protein kinase domain profile. 87 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03737 571 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 55 517 - -
Tsu06g03737 571 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 55 517 - -
Tsu06g03737 571 MobiDBLite consensus disorder prediction 488 530 - -
Tsu06g03737 571 Gene3D Transferase(Phosphotransferase) domain 1 173 401 - -
Tsu06g03737 571 ProSitePatterns Protein kinases ATP-binding region signature. 93 117 IPR017441 GO:0005524
Tsu06g03737 571 SUPERFAMILY Protein kinase-like (PK-like) 81 383 IPR011009 -
Tsu06g03737 571 Gene3D Phosphorylase Kinase; domain 1 103 424 - -
Tsu06g03737 571 SMART serkin_6 87 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03737 Tsu-Chr6 49478598 49484344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03737 1 569 MAP Kinase Gene Family AT1G73670 72.041 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu06g03737 Pkinase 4.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03737 - - gmx:100776784 903.664