Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03704 ATGCAGTGGTCATTCTCAAATAAAGGTTCAAACCTTCCTCAATTCTTGTCTTTCAAGAACACTCATGAAGATAGGTCAAGAAACACTATTATGGATCCAGTAGCTTCTTCTGGATATATGACTATTTCAACTAAAGATGCTTTTGAGTCTAATCAGAAATCATTCTTGGGTGTGACACAGgaaaatttGTCCATGGCAAAGCAAGTAGGAAACAAGCATGGAATGACAGTTTATCCTTTACAATCTTCTGATGCACAATTTTCAGTTTCAAACCAATCTAATAATCAAATGTCTTCTGTTCTTCAATCTAATCAATTGGTTAATTCAGTTACAAGATCACAATCTTTTGGTTCTAAATCCTCTGCCCCACCTGTATCTGTTCTTCCATCAATAGGTTCGATAGTTGGTTCTACTGACTTAAGgaataGGAACTGTTCCAAATCCAATGGTACTATGACAATTTTTTACGGCGGTTCGGTATGTGTGTATGATGACATATCTCCTGAAAAGGCTAAGGCTATCATGTTACTAGCTGGAAATGGCACTAAAATGCAACCAGAAATCTCTATTCCTTCCAAAAAAGATGGTGTCAATATAAGCCAATCATATCCTTCACCATTGCCAAGTCCTCTTCCAATGACCTCTCATGCAAGTAATCAACCAAGGGGAGGATCAAGTAGCAACAATGAAGTCACAATAATAAGATCTTTAGGACCTTCAGTTGCCCCTGCCAGCACTTTGGAGTCTCCTATTCTTGCTACTTCTTTAGGATCTACACCTACAAAAGTGATTCAACAAGTAGGCTTGCCTCAGGCGCGAAAAGCATCGCTGACTCGGTTTTTGGAAAAGCGAAAGGAAAGGGCAATGAGCACATCACCATACTATATAAGCAAGAAATCACCTGAATCAGATAGTGCTAGTTTCTCCATTGACTTCTCTAGTTCATGTCCTCTACCAGCCACAACAAACATGCCCTTAAGAAGAACATGTATGGAAGGAATTAgatga 1008 0.3849 MQWSFSNKGSNLPQFLSFKNTHEDRSRNTIMDPVASSGYMTISTKDAFESNQKSFLGVTQENLSMAKQVGNKHGMTVYPLQSSDAQFSVSNQSNNQMSSVLQSNQLVNSVTRSQSFGSKSSAPPVSVLPSIGSIVGSTDLRNRNCSKSNGTMTIFYGGSVCVYDDISPEKAKAIMLLAGNGTKMQPEISIPSKKDGVNISQSYPSPLPSPLPMTSHASNQPRGGSSSNNEVTIIRSLGPSVAPASTLESPILATSLGSTPTKVIQQVGLPQARKASLTRFLEKRKERAMSTSPYYISKKSPESDSASFSIDFSSSCPLPATTNMPLRRTCMEGIR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03704 335 MobiDBLite consensus disorder prediction 212 230 - -
Tsu06g03704 335 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 1 205 - -
Tsu06g03704 335 SMART tify_2 145 180 IPR010399 -
Tsu06g03704 335 ProSiteProfiles Tify domain profile. 145 180 IPR010399 -
Tsu06g03704 335 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 205 IPR040390 -
Tsu06g03704 335 MobiDBLite consensus disorder prediction 184 230 - -
Tsu06g03704 335 Pfam tify domain 150 179 IPR010399 -
Tsu06g03704 335 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 202 335 - -
Tsu06g03704 335 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 202 335 IPR040390 -
Tsu06g03704 335 Pfam Jas motif 270 295 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03704 Tsu-Chr6 49074243 49077200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03704 1 300 Tify Gene Family AT3G17860 41.231 6.18e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tsu06g03704 tify 1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03704 K13464 - gmx:100807288 356.295