Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03699 atgcaaATGAAGTTTCACAAGCTAAAACTGTTCTTCTTTTTTCTGACAATTTTTCTTCCGTCAGTAAAATCTGATTTAACTTCTGAACGCGCCGCTCTCTTAAAACTACGCTCCGCCGTAACTGGAAGAACCCTTCTATGGAACACAACCTCCGCCACTCCCTGTAACTGGCCCGGCGTACATTGTGACCAAAACCATACTCACGTAGTCGAGCTTCATCTTCCTGCTGTTTCACTCTCCGGCAACCTCCCCGCCGGCGTATTCTCCGACCTCCCTAACCTCCACACTCTCAGCCTCCGTTTCAATTCCCTCTCCGGTCCTCTTCCCTCTGACCTCTCCGCTTGCACTTCCCTCAAAAACCTCTACCTCCAGCAGAATCTTCTGTCCGGCGAAATTCCGGCGACACTTTTTCAACTCACCGGTCTTGTTCGTGTCAATTTGGCTTCCAATAACTTTTCCGGTAAAATTCCGGCTGGGTTTCAAAACCTAACCCGGTTGAAAACCCTATATCTTCAAAACAACCGGTTCACCGGTTCTCTTACTGAGTTGAACCGGGTTCAACTCGATCAATTCAATGTTTCAAACAACATGTTGAACGGTTCAGTTCCTGAAAAGTTGCAAACTTTTGGTAAAGATTCGTTTTTGGGTAATCTCTTATGTGGGAAACCCCTTAACCCTTGTCCTAAAGAAGGAGGTACAAATAGTGGAACTGGGGGTGCACATAGTGGTAATGGTAATTCAAGTGTGGTTGATGGAAATCAAGGGTTtgtgaagaacaagaagaaaggAAAATTATCTGGTGGTGCTATAGCTGGAATTGTTATTGGGTCTGTTGTGATTCTTTTGTTTGTAGTTTTTGCTTTGATTCTCTTATGCAGGAATAGGAATGGTGAAAAAACTAGTTCAATTGATGATGTTGCAGCAACTTTGAAGCATAATCAGAATGATGAGGAGATTGGAAATGGGTATTCGTCGGCCGCAGCGGCTATGGCTGCGCCGGCGGCAGTGAATGGTGAGAGAGGTGGTGAAAGTGTTGTTATTGGTGGTGGTGAGaaaaaattggtcttttttAGGAATTGGGGTAAGGTGTttgatttggaggatttgttAAGAGCTTCTGCTGAGGTATTAGGGAAAGGGACATTTGGGACATCTTATAAGGCAGTTTTGGAAGTTGGTCCTGTGGTTGTGGCTGTGAAGAGGTTAAGGGATGTGACTATTTCTGAGAGGGAATTTAAGGAGAAGATTGAAAGGGTTGGTTCAATGGTTCATGAAAATTTAGCACCTCTTAGGGCTTACTATTATAGTAGAGATGAGAAGCTTCTTGTTCATGATTATTTGCATATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGGGGGTAGGACACCACTGAATTGGGAAATGAGATCAGGCATTGCACTTGGAGCTGCTCGCGGCATTGAGTACTTACATTCACAAGGACCTAATGTTTCTCATGGAAACATAAAATCATCCAACATTTTGCTAACCAAGTCCTATGATGCAAGAGTATCTGATTTTGGTCTAGCACATCTTGTTGGTCCTTCATCCACACCTAACAGGGTTGCCGGCTACCGTGCTCCCGAAGTAACTGATCCACGGAAAGTTTCTCAGAAGGCAGATGTATACAGCTTTGGTGTATTGCTCTTGGAACTTCTGACTGGGAAGGCTCCAACTCATGCCCTCTTGAATGACGAAGGAGTCGACCTTCCGAGGTGGGTGCAATCGGTTGTTAAAGAAGAATGGACTTCTGAGGTCTTTGATCTTGAACTCCTTAGGGATCAAAATGTTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCAGTAGATTGCGCTGCCACTTACCCCGATAACCGCCCTTCGATGTCGCAAGTGAGACAGCACATAGAAGAGCTCCATAGGTCTAGCTTGAAAGAAAGTCTAGACCAAATTCAACAACCAGATGACGATGTAGACGATATCTCCTCTAGATGA 2001 0.4343 MQMKFHKLKLFFFFLTIFLPSVKSDLTSERAALLKLRSAVTGRTLLWNTTSATPCNWPGVHCDQNHTHVVELHLPAVSLSGNLPAGVFSDLPNLHTLSLRFNSLSGPLPSDLSACTSLKNLYLQQNLLSGEIPATLFQLTGLVRVNLASNNFSGKIPAGFQNLTRLKTLYLQNNRFTGSLTELNRVQLDQFNVSNNMLNGSVPEKLQTFGKDSFLGNLLCGKPLNPCPKEGGTNSGTGGAHSGNGNSSVVDGNQGFVKNKKKGKLSGGAIAGIVIGSVVILLFVVFALILLCRNRNGEKTSSIDDVAATLKHNQNDEEIGNGYSSAAAAMAAPAAVNGERGGESVVIGGGEKKLVFFRNWGKVFDLEDLLRASAEVLGKGTFGTSYKAVLEVGPVVVAVKRLRDVTISEREFKEKIERVGSMVHENLAPLRAYYYSRDEKLLVHDYLHMGSLSALLHGNKGGGRTPLNWEMRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNDEGVDLPRWVQSVVKEEWTSEVFDLELLRDQNVEEEMVQLLQLAVDCAATYPDNRPSMSQVRQHIEELHRSSLKESLDQIQQPDDDVDDISSR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03699 666 Gene3D Phosphorylase Kinase; domain 1 350 446 - -
Tsu06g03699 666 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 666 - -
Tsu06g03699 666 PANTHER OS05G0588300 PROTEIN 9 666 - -
Tsu06g03699 666 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Tsu06g03699 666 Gene3D Transferase(Phosphotransferase) domain 1 447 663 - -
Tsu06g03699 666 SUPERFAMILY L domain-like 37 207 - -
Tsu06g03699 666 Gene3D Ribonuclease Inhibitor 187 227 IPR032675 -
Tsu06g03699 666 Pfam Protein kinase domain 374 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03699 666 ProSiteProfiles Protein kinase domain profile. 371 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03699 666 SUPERFAMILY Protein kinase-like (PK-like) 375 644 IPR011009 -
Tsu06g03699 666 MobiDBLite consensus disorder prediction 647 666 - -
Tsu06g03699 666 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03699 Tsu-Chr6 49013093 49016242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03699 8 657 Receptor kinase-like Gene Family AT1G48480 55.887 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu06g03699 Pkinase 3.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03699 - - gmx:100781597 862.062