Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03691 ATGTATGAAATTCCTTCCTCTACATTCCAAAACCAAATCCCATTATCAATGCCATCTTCTTCCCTTTTCACAGTTGCCACCCCTTCAAACTTCAAGTTCAAAACAACAACTCGTTTCCCTTTCTCCTACACTAGAAACCGCTCTCGTTTTGCCTCAGTTGTCACAGCCAAAGCTGGAAATGATTACTACTCAACTTTGAATCTTAGCAACAATGCTTCGTTGCAAGAAATCAAGACCTCCTACCGGAAATTAGCGCGCAAGTATCATCCAGATATGAACAAAAGCCCAGGAGCAGAAGAGAAGTTCAAAGAGATTAGTGCTGCCTATGAGGTTCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGACTACAAGGAGAAAATGGACGACCGGCCAGTGCCTCAGGGGTTGATCCTTCTGACTTATATGAAGCATTCTTTAGTCGTTCTGAGGGACTGTTTAGGGATGAAGGGGGTTTCAGCTTCAATATGAGAAACAATAGAAACCGTGGCCATGATATTCGGTATGACCTTCGTTTGAGCTTCGAAGAATCTATTTTTGGAGGAAAGAGAGAGATTGAAGTTTCTTGTTATGAGACATGTAGCAATTGTGATGGTACAGGAGCTAAATCAGCGAAAGGCATTAAAAAATGCACAAATTGTGGTGGCAAAGGAGGAGAGAAGAAAACTCAGAAAACACCGTTTGGAATGATGTCTCAGGTTTCTACCTGCTCCAAGTGTGGTGGTTTCGGCATGATAATCACAGAAAGCTGTCGAAAGTGTGATGGCAGTGGTCGAGTGCAAGCTAAACGAAAAATGGAAGTGACTGTTCCTCCTGGCGTCAATGATGGAGACACAATGCAAATTCGAGGTGAAGGGAATTTTGATAAGAGGAGCATCTTTAAAATATGGTTTGGTAAAGGAATTTCTTTTTACTGTTGTATGTCTTTGAATATTGTTTTGACTTTAAACTTGTTATTCCAGGTAGAAACGATTGAAGGTTTCAGGGACCTTAAAATTCCTTCAGGGATTCAACATGGACATTCAGTAAAGTTATCACGATTGGGAGTCCCTGACATGAATAAACCATCTATTCGGGGCGATCATTACTTCGTTGTAAATGTTCTTATTCCTAAAGATATCAGTGGCATGGAACGCGCACTTGTTGAGCAGTTAGCTTCACTGAGAGCATCTAGGAGAGGTCATTCATTTTCTTCTGATGACAGTGGGATACCTAAAGGAAAATTCAATGATTACATGTGGAGAGATAAAAAAAGTGATGCAAGTGATGCCTCAAGCGAGGGAACTGAAAATTCAAATTCTCTTTGGGGATCAATCAAAAACATCTTCAGGAGAGGAAACTCTGAAGGAAAGTTTGCATCAATTAGCCAAGATACATCAACACTGGCGTGGAGATTTAGCCACCAAAATTATTCAGGGGCTGTGGACCGGGGATCAGACAAAGCACAAGTCAATCAGCACTACGCCTCAATCCTTGAGCCTCGTGCTTGGGGGCTGTGGACCGGGGGATCAGATAAGGCCCAACTCGTCCAAACCCAGTACGTATCAACTGTTGGGCTGTCCTATCTAAGAAACTGGCCCAAGCCCATTGAATACTGGAGGTTATCAGTTCAAACCCACGTTCACCTAAGAACACGTGAGAAGGGCGAGCAGGCGAGTCTTTGGCCACGATCATCCAGCTccccagtggagatcgtggggaaatggGGAGTCCAAAGCATTGGCAGTTATCTCGGGACTACTACATATAGACCCTTCACCAATAACAAAAGTCAGATTGATTAA 1821 0.4201 MYEIPSSTFQNQIPLSMPSSSLFTVATPSNFKFKTTTRFPFSYTRNRSRFASVVTAKAGNDYYSTLNLSNNASLQEIKTSYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGRPASASGVDPSDLYEAFFSRSEGLFRDEGGFSFNMRNNRNRGHDIRYDLRLSFEESIFGGKREIEVSCYETCSNCDGTGAKSAKGIKKCTNCGGKGGEKKTQKTPFGMMSQVSTCSKCGGFGMIITESCRKCDGSGRVQAKRKMEVTVPPGVNDGDTMQIRGEGNFDKRSIFKIWFGKGISFYCCMSLNIVLTLNLLFQVETIEGFRDLKIPSGIQHGHSVKLSRLGVPDMNKPSIRGDHYFVVNVLIPKDISGMERALVEQLASLRASRRGHSFSSDDSGIPKGKFNDYMWRDKKSDASDASSEGTENSNSLWGSIKNIFRRGNSEGKFASISQDTSTLAWRFSHQNYSGAVDRGSDKAQVNQHYASILEPRAWGLWTGGSDKAQLVQTQYVSTVGLSYLRNWPKPIEYWRLSVQTHVHLRTREKGEQASLWPRSSSSPVEIVGKWGVQSIGSYLGTTTYRPFTNNKSQID 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03691 606 Hamap Chaperone protein DnaJ [dnaJ]. 58 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Tsu06g03691 606 Pfam DnaJ C terminal domain 179 383 IPR002939 -
Tsu06g03691 606 SMART dnaj_3 60 117 IPR001623 -
Tsu06g03691 606 Gene3D - 321 412 - -
Tsu06g03691 606 SUPERFAMILY Chaperone J-domain 59 158 IPR036869 -
Tsu06g03691 606 Gene3D - 206 270 - -
Tsu06g03691 606 Gene3D DnaJ domain 58 162 IPR036869 -
Tsu06g03691 606 PRINTS DnaJ domain signature 63 81 IPR001623 -
Tsu06g03691 606 PRINTS DnaJ domain signature 81 96 IPR001623 -
Tsu06g03691 606 PRINTS DnaJ domain signature 97 117 IPR001623 -
Tsu06g03691 606 PRINTS DnaJ domain signature 117 136 IPR001623 -
Tsu06g03691 606 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 393 IPR008971 GO:0006457|GO:0051082
Tsu06g03691 606 CDD DnaJ_C 178 386 - -
Tsu06g03691 606 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 193 273 IPR036410 -
Tsu06g03691 606 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 67 406 - -
Tsu06g03691 606 PANTHER EXPRESSED PROTEIN 67 406 - -
Tsu06g03691 606 Gene3D - 176 300 - -
Tsu06g03691 606 ProSiteProfiles Zinc finger CR-type profile. 193 275 IPR001305 GO:0031072|GO:0051082
Tsu06g03691 606 SUPERFAMILY HSP40/DnaJ peptide-binding domain 178 302 IPR008971 GO:0006457|GO:0051082
Tsu06g03691 606 Pfam DnaJ central domain 206 270 IPR001305 GO:0031072|GO:0051082
Tsu06g03691 606 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Tsu06g03691 606 CDD DnaJ 61 114 IPR001623 -
Tsu06g03691 606 ProSiteProfiles dnaJ domain profile. 61 125 IPR001623 -
Tsu06g03691 606 CDD DnaJ_zf 206 270 IPR001305 GO:0031072|GO:0051082
Tsu06g03691 606 Pfam DnaJ domain 61 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03691 Tsu-Chr6 48929721 48940934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03691 62 122 C2H2 Transcription Factor Family AT1G74250 43.284 2.03e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03691 K03686 - gmx:100782135 608.216