Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03687 ATGTGTTTCAGTTTTCGCTGCTTCGTCTGCCTCTATTGCACAATCTACACAGTTATATTCTTCTTTGTGGCTTTCACAACCATCCTATGGATTGTAATCTCCCCATCAAGTGTAAAATTTCACATAACCGACGCTACTCTCACCGAGTTCAACATTACAAACAACAATACCCTATATTACAATTTCAAAGTCAATGTCACTGCACGAAACCCAAATGATAACATCATTGTCTATTATCGACAAATCACCGCAATTGCTTGGTACAAAGATAACGATTTTGGTTATGTGAGTTTGACACCCTTTGATCAAGGTCACAAAAATACAACATTTCTCGGGCCAATTGTGTTTAATGGGAACCGTACAATCAAACTTGGACATCAACAGCTTGTCGAGTATTTTGAAGAGACGCGTCTCGGGAGTTATAATGATTTGGCTGTTGATTTTGATGTTCATATTAAAGCTAAATTTGGACGCTTTAAAAGTGGTCGGTTTAATACACCAATGGTGCAGTGTCGTCGTTTGAGAGTTCCTTTGGTTTCAGCTTCCAATAGTACTCACTCATTAtcatcattttcttttagtGAGAGAAGATGTAGCAGTGGTTCTTTCTTTACGGATCGTAATGCAAATGCTGGAGATTGA 642 0.3754 MCFSFRCFVCLYCTIYTVIFFFVAFTTILWIVISPSSVKFHITDATLTEFNITNNNTLYYNFKVNVTARNPNDNIIVYYRQITAIAWYKDNDFGYVSLTPFDQGHKNTTFLGPIVFNGNRTIKLGHQQLVEYFEETRLGSYNDLAVDFDVHIKAKFGRFKSGRFNTPMVQCRRLRVPLVSASNSTHSLSSFSFSERRCSSGSFFTDRNANAGD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03687 213 Pfam Late embryogenesis abundant protein 65 164 IPR004864 -
Tsu06g03687 213 PANTHER HARPIN-INDUCED 1 17 204 - -
Tsu06g03687 213 PANTHER OS05G0367900 PROTEIN 17 204 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03687 Tsu-Chr6 48884613 48885254 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03687 32 185 SNARE and Associated Proteins AT1G32270 29.560 5.93e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03687 - - mtr:MTR_6g070890 315.849