Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03673 ATGGAATCTAAGATGAATAGTTTTGTTGATGATGAGAAGTACAAACATGAAGATCAAGAAGATGGTGGTGGCCATGAACATGATCATCAAGAGGAAAATAGTGAGATTCTTAAGACAAGAATCTCTAATCATCCTCTCTATGAGCTTCTTGTTGAAGCTCACTTGGATTGTTTGAAGGTTAGTGAGATTTCTAACATGGagacaaagaaaaaagataagaaGAAAGCAATGAAGAAACAAAACTTGGATATGTTAAGGCAATCTGAGCTTGATCTCTTCATGgaaGCATATTGTTTGGCACTTAATAAGCTAAAAGAAGCAATGGAGGAACCACAACAAACTTCCATTGAATTCATAAACAACATGCATTCACAACTTAGGGAGCTAACTCAAGCAACTACACCTCCATCTACTGAACCAGCTGCTACTACATCTTCAAGTGAATGCACATTCAGAAGAAACCCAACAATTTAA 474 0.3502 MESKMNSFVDDEKYKHEDQEDGGGHEHDHQEENSEILKTRISNHPLYELLVEAHLDCLKVSEISNMETKKKDKKKAMKKQNLDMLRQSELDLFMEAYCLALNKLKEAMEEPQQTSIEFINNMHSQLRELTQATTPPSTEPAATTSSSECTFRRNPTI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03673 157 MobiDBLite consensus disorder prediction 1 35 - -
Tsu06g03673 157 SMART KNOX1_2 35 75 IPR005540 GO:0003677|GO:0005634
Tsu06g03673 157 SMART KNOX2_2 80 131 IPR005541 GO:0003677|GO:0005634
Tsu06g03673 157 Pfam KNOX2 domain 87 130 IPR005541 GO:0003677|GO:0005634
Tsu06g03673 157 PANTHER FUSED COMPOUND LEAF 1 1 127 - -
Tsu06g03673 157 Pfam KNOX1 domain 37 60 IPR005540 GO:0003677|GO:0005634
Tsu06g03673 157 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 127 - -
Tsu06g03673 157 MobiDBLite consensus disorder prediction 131 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03673 Tsu-Chr6 48618366 48621917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03673 35 132 Homeobox Transcription Factor Family AT4G08150 35.238 6.98e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03673 - - mtr:MTR_6g071190 221.476