Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03630 ATGTGTTTAAACATCCAAGaaacaattttcGATCTCATAACACTGCTAATAGATCTTAGATTAAAACCCACAAGCAGAAACATTTGTGGTACGAGGATTCTTGTTGTGATGGATGGAGATAATGGTCTTAACATAAGCAATTGGGGATACTATGAACCTGTTTCCTCTTTTAAGAGTCATCTTGGGTTACAACTGATGCCATCGATGCCGGAGAAGCCTCTGCTTGGGGCTCATAATGGTGCTGTTTTGTCGGGTTCTAACGGTGCATTTCGCCATAGGGATATGGGGTTGCCACAAACTACATACCCTATGGATTATATGAGGGATGCATGGATTAGTAGTCAGAGGGATAATaagtatatgaatatgaatatgatacCTACTAACCCTCCAGGTTATAGTAGTATTCCCGAGACATCTTCGGCTCATCATATTCAAATGATACGGCCACCTGAATTGGTTAAGGAAGAAAGGCCAATGGAGGAGGCACCTGTGGTTGAGAAGTCAAATGGAACTGGTAAGAAGAGGCAAGGGCCGAAGGTTCCTAAATCTCCCAAGGCAAAGAAACCTAAGCGGGGACCTCGTGTGCCGAAGGACGAGAATTCTCCTTCGGTTCAACGAACACCGAGGGCTCCAAAGAAAActactgaaattgcaattaatgGGATTGATTTGGATATTTCGAGTATTCCAATTCCTGTTTGTTCGTGCACTGGAACACCTCAACAGTGTTATAGATGGGGATCGGGTGGGTGGCAATCTGCATGTTGTACAACAGCTATATCGATATATCCTTTACCTATGAGTACTAAACGGCGTGGTGCTAGAATAGCTGGAAGGAAGATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCGGCCGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTACTGGGCAAAACATGGCACCAACAAGTTTGTTACTATCAGGTAG 972 0.4115 MCLNIQETIFDLITLLIDLRLKPTSRNICGTRILVVMDGDNGLNISNWGYYEPVSSFKSHLGLQLMPSMPEKPLLGAHNGAVLSGSNGAFRHRDMGLPQTTYPMDYMRDAWISSQRDNKYMNMNMIPTNPPGYSSIPETSSAHHIQMIRPPELVKEERPMEEAPVVEKSNGTGKKRQGPKVPKSPKAKKPKRGPRVPKDENSPSVQRTPRAPKKTTEIAINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTAISIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03630 323 MobiDBLite consensus disorder prediction 152 217 - -
Tsu06g03630 323 SMART GAGA_bind_2 37 323 IPR010409 -
Tsu06g03630 323 PANTHER - 37 323 IPR010409 -
Tsu06g03630 323 Pfam GAGA binding protein-like family 37 323 IPR010409 -
Tsu06g03630 323 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 37 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03630 Tsu-Chr6 48028921 48030391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03630 37 323 BBR or BPC Transcription factor family AT2G01930 51.171 2.10e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Tsu06g03630 GAGA_bind 8.7e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03630 - - cam:101489911 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03630 06 48028921 48030391 Tsu06g03630 06 48028921 48030391 ECH