Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03604 ATGTTCATTAGTTTTAGGGGTGCTGACACTCGATTCGGTTTTACCTGTAATCTCTATAAAGCTCTATCTGACAAAGGAATCCGAACCTTCATTGATGACAACGAGCTTCAGAAAGGAGACAAAATCACACCTTCGCTTCTCAAGAACATTGAAGACTCAAGGATTGCCATTATTGTCTTCTCAAAGGACTATGCTTCTTCGTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTACTTTGAGGAAAAAGGTCGTCTGGTTCTGCCAGTTTTCTATGATGTGGAACCTTCTCACGTGCGACATCAAAATGACAGTTATGCTATAGCATTCGCTAAGCATGAAATGAGGTTCCAGAATAACAGCGAAAACATGAAGCGGTTGCTGAAATGGAAGATAGCTCTTAGCCATGCTGCTAACTTGTCCGGGTACCATTTCAATCTTAGGAAAGAAGAATATGAATATGTATTTATTAAGAATATTGTAACTGAGatttccaacaagatcaatcGTGTACTTTTACATGTTGCTGACCACCCGGTTGGGCTCGAGTCTCGACTGCTGCAAGTACAGTCGCTTCTAAATGTTGACTATGATAATGGAGTTTGTTTGATAGGGATATGTGGAAGTGGAGGATTAGGTAAAACAACACTTACTCGAGCAGTTTATAATTTGATTGCCGATCAATTTGAAGGTTTGTGTTTCCTTCACAATGTGAgagaaaattcaattaaatatgGTTTAGAATATCTACAAGAGCAACTCCTCTTCAAAACAATTGGATTGAAAATTCAGCTAGGACATGTTAGTGAAGGAGTTCCGATCATAAAACAAAGGCTACATCGAAAGAAAGTTTTGTTGATTCTCGATGACATCGACAAACTAGAGCAGCTACAGAGTTTAGTTGGAAAGCCTTGTTGGCTTGGTCCGGGAAGCAGAGTCATTATTACCACGCGAGACAAGCATTTGCTATCATGTCATGGGATTGAAAGAATATATGAAGTAGATGGCTTAAATGAGAAAGAAGCTATTGAATTGTTTATGTGGATGGCttttaaaagtaacaaaattggTTCAAGTTATGATTATATATTAAACCGTGCAGTTAAATATGCTTCTGGACTTCCATTAGCTTTAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGTATTgcagaatggaaatctacattAGATAAGTATGAAAGGATTCCACATGAAGATATCCAAAAGATACTTAAAGTAAGCTATGATGCTTTAGACGAAGAACAAAAAAGTGTCTTTTTAGATATTGCTTGTTGCTTCAAAGAGAGTGAATTTACAGAAGTCGAAGAGATACTTCATGCTCATTATGGCCATTGCATAAAAAGCCACGTAGGAGTGTTAGTTGATAAGTCTCTCATAAAGATTAATGTTGATGGTCATGTGACATTACATGACTTGATAGAGGATATGGGTAAAGAAATTGTTCGACAAGAATTGCCCAAAGAGCCTGGAAAACGTAGTAGGTTGTGGTTTCATGTTGATATAATTCatgttttcaaagaaaatacgGTGAGTAAAACTAATATCTACATAAATTTCTTACTATATGTGTGCCGAAGTTATATATGCATTGTGATTGATCttcaatttttgtctcaaaagGGAACtagcaaaattgaaattatacATTTGAATTCTCCCTCAACCAATGCAACAATAGATTGGAATGGAAAGGCCTTCAAGAAGATGACTAAACTGAAAACACTTATCATTGAAAATTGTCATGTTTCTAAAGGTGCAATATATCTTCCAAGTAGTTTGAGAGTATTGAAATTGAATAGATGTCCTTCAGAGTCTCTACCATCTAGCATTTTGAACCAGAAGTTTGAGTACATGAAAGTTTTGACATTTGACTATTGTCAATATTTAACCGATATACCCGATGTCTCTCGTCTTCCAAATTTAGAAAAGTTTTCGTTTGGATGTTGTTACAACTTAATTACAATTCACAATTCAATTGGGTATCTAAAGAAACTCGAAATCTTAATTGCATATGGTTGCAGCAAGCTTGAGAAATTCCCACCCTTATACTTGACATCTCTTAAGAAATTGGAACTTTCTTATTGTAAGAATCTCAAGAGTTTTCCAGAATTATTAGGCAAGATGacaaatataaaagatatttggTTGTGTAGAACTTCAATAGGAGAATTTCCATTTTCGTTTCAAAATCTAAGTGAACTTCGGAAATTAACAATAAGTGGATGTGGAATTATCAAGCTTTCAAGTAACATTTTTATGATGCCAAAGTTGTTAAAGATTACTGTTAAGAATTGTCATCTATTATTGCCAAAACAGAATGATGATTTGAGTTCAACAGTGTCTTTGAATGTTAAATGTCTTCATCTTGTAAAGAATAGCCACTCAAATGAATGGTTatga 2427 0.3342 MFISFRGADTRFGFTCNLYKALSDKGIRTFIDDNELQKGDKITPSLLKNIEDSRIAIIVFSKDYASSSFCLDELVHIIHYFEEKGRLVLPVFYDVEPSHVRHQNDSYAIAFAKHEMRFQNNSENMKRLLKWKIALSHAANLSGYHFNLRKEEYEYVFIKNIVTEISNKINRVLLHVADHPVGLESRLLQVQSLLNVDYDNGVCLIGICGSGGLGKTTLTRAVYNLIADQFEGLCFLHNVRENSIKYGLEYLQEQLLFKTIGLKIQLGHVSEGVPIIKQRLHRKKVLLILDDIDKLEQLQSLVGKPCWLGPGSRVIITTRDKHLLSCHGIERIYEVDGLNEKEAIELFMWMAFKSNKIGSSYDYILNRAVKYASGLPLALEVVGSNLFGKSIAEWKSTLDKYERIPHEDIQKILKVSYDALDEEQKSVFLDIACCFKESEFTEVEEILHAHYGHCIKSHVGVLVDKSLIKINVDGHVTLHDLIEDMGKEIVRQELPKEPGKRSRLWFHVDIIHVFKENTVSKTNIYINFLLYVCRSYICIVIDLQFLSQKGTSKIEIIHLNSPSTNATIDWNGKAFKKMTKLKTLIIENCHVSKGAIYLPSSLRVLKLNRCPSESLPSSILNQKFEYMKVLTFDYCQYLTDIPDVSRLPNLEKFSFGCCYNLITIHNSIGYLKKLEILIAYGCSKLEKFPPLYLTSLKKLELSYCKNLKSFPELLGKMTNIKDIWLCRTSIGEFPFSFQNLSELRKLTISGCGIIKLSSNIFMMPKLLKITVKNCHLLLPKQNDDLSSTVSLNVKCLHLVKNSHSNEWL 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03604 808 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 783 IPR044974 GO:0006952
Tsu06g03604 808 CDD AAA 181 295 - -
Tsu06g03604 808 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 144 IPR035897 -
Tsu06g03604 808 ProSiteProfiles TIR domain profile. 1 169 IPR000157 GO:0007165
Tsu06g03604 808 Gene3D - 337 421 IPR042197 -
Tsu06g03604 808 Gene3D Ribonuclease Inhibitor 534 691 IPR032675 -
Tsu06g03604 808 Gene3D Ribonuclease Inhibitor 692 807 IPR032675 -
Tsu06g03604 808 SUPERFAMILY "Winged helix" DNA-binding domain 408 514 IPR036390 -
Tsu06g03604 808 Gene3D - 1 168 IPR035897 -
Tsu06g03604 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 431 IPR027417 -
Tsu06g03604 808 SUPERFAMILY L domain-like 561 795 - -
Tsu06g03604 808 Pfam NB-ARC domain 189 422 IPR002182 GO:0043531
Tsu06g03604 808 Pfam TIR domain 2 171 IPR000157 GO:0007165
Tsu06g03604 808 PRINTS Disease resistance protein signature 372 386 - -
Tsu06g03604 808 PRINTS Disease resistance protein signature 279 293 - -
Tsu06g03604 808 PRINTS Disease resistance protein signature 204 219 - -
Tsu06g03604 808 PRINTS Disease resistance protein signature 691 707 - -
Tsu06g03604 808 Gene3D - 169 330 IPR027417 -
Tsu06g03604 808 PANTHER ARCHAEAL ATPASE 9 783 - -
Tsu06g03604 808 SMART till_3 2 141 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03604 Tsu-Chr6 47498660 47517501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03604 14 774 WRKY Transcription Factor Family AT4G12020 28.075 2.66e-62 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03604 - - mtr:MTR_6g072460 1024.62