Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03594 atgaaTGCCCCAACgaagaaaaaaattcagaaaaaatgcaaaatcaGAGGCTACAATATCAAAGTCGAAGCTCTCGACGAGATTCTCTCCTTCGTTACTCGCTTTGAACCCGCCGAACAAGACGAAGCCATCGATCTCGTTCTTGACCAGCTCGAAAGCGAATCTCTGAAATCTACTATAATCGATGTGGAGCCGGTGCAACGAGTGGTGAATTTGTTACTGGAAGCCGACGAAAAGGAGGAAACTAATAACAACTTCGCTTCGTCGTCTTCTTCCGCCATTTCtgtaattaatgtatttgacgTTCCTAGATATAAATATGATGCTATCAGAAGGAATTTTTACCAACACACAGGAAGCTCACCTATACATGGGGACGCACAAGCAAAATCCGCTCTGTACAGGGATAGGTTTTTGTTATTGTCTCAGAGACTTTCTCGTCACCAGGATTTTTCGAGGCCGGCTTTTGAGTCCGATCTTTCACAATTCCGGAGTTGTGAGATATCTCCTATTCAATCTCTGGTTGGGCAAAAAGGTAGAAGATGGGTAATGGGAGTAATTTCTCAGCTGGAGGATGGCCATTTTTATTTGGAAGACCTTACTGCTTCAGTTGAAATCAACTTATCTGATGCTAAGATTACTACAGGATTCTTCTTAGAGAACACCATAGTTGTGGCCGAAGGCGAGATGCTTGCAGAGGGTATTTTTAAGATTTTTACATGTGGGTTTCCACCATTAGAAGATAGAGATAAATCACTTCAAGTGCTTTCAGGCCATGACTTTTTTGGTGGTGGTATTTTTACAAAAGAAGAAACGATTAGGCTGGAAGAATTGGAGAAAAGAGCAGTCAATGACATGTTTGTCATATTATCTGATGTTTGGATAGACAAAGAAGAGGCTATAGGAAAGATAGAGACTGTTCTTGATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTTATGGGAGACTTCTGTTCTCAACCATGTAGCCTTGCATTTAACTCTTATTCGAGCCTAAGGTCCCAATTTGGCAAGCTAGGGCAAATTATTGCTGCCCGTCCACGGTTAAAAGAGAACAGCCGATTTCTTTTTATTCCAGGTCCTGGTGATGCAgTTGCTTCGACAGGTCTTCCTAAGTGTGCTCTACCTAAATATTTAGTTGAGGAGCTCGTAAAGTATATTCCCAATGCCATATTCTCAAGCAATCCCTGCAGGGTAAAATTCTATACCCAAGAAATAGTATTTTTCCGCCAGGATCAGCTGTATACAATGCGCCGTTCTTGTTTATTGCCACCTTCTGAGACAGAAACTGTTGATCCTTTTCAGCATCTTGTTGCCACCATAACCCATCAGAGTCATCTCTGCCCGTTCCCTCTAACTAAAGAACCCATCGCATGGAATTATGACCATACCCTTCATTTATATCCAACTCCACACACGATAGTTTTAGGAGACAGAAGTCCGCAGAAGGCTTTTAAGTACACAGGAATCACTTGTTTTAATACCGGATCCTTCTCGATGGATAGCACATTTGTAGTATACCGTCCTTGCAATCAGGAAGTTGAATTGTCATCATTGTAA 1590 0.4057 MNAPTKKKIQKKCKIRGYNIKVEALDEILSFVTRFEPAEQDEAIDLVLDQLESESLKSTIIDVEPVQRVVNLLLEADEKEETNNNFASSSSSAISVINVFDVPRYKYDAIRRNFYQHTGSSPIHGDAQAKSALYRDRFLLLSQRLSRHQDFSRPAFESDLSQFRSCEISPIQSLVGQKGRRWVMGVISQLEDGHFYLEDLTASVEINLSDAKITTGFFLENTIVVAEGEMLAEGIFKIFTCGFPPLEDRDKSLQVLSGHDFFGGGIFTKEETIRLEELEKRAVNDMFVILSDVWIDKEEAIGKIETVLDGFESVEVVPSLFVFMGDFCSQPCSLAFNSYSSLRSQFGKLGQIIAARPRLKENSRFLFIPGPGDAVASTGLPKCALPKYLVEELVKYIPNAIFSSNPCRVKFYTQEIVFFRQDQLYTMRRSCLLPPSETETVDPFQHLVATITHQSHLCPFPLTKEPIAWNYDHTLHLYPTPHTIVLGDRSPQKAFKYTGITCFNTGSFSMDSTFVVYRPCNQEVELSSL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03594 529 Pfam DNA polymerase alpha/epsilon subunit B 287 492 IPR007185 GO:0003677|GO:0006260
Tsu06g03594 529 PIRSF DNA_pol_epsilon_2 1 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
Tsu06g03594 529 Gene3D - 2 72 - -
Tsu06g03594 529 Pfam DNA polymerases epsilon N terminal 3 71 IPR024639 -
Tsu06g03594 529 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 7 528 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03594 16 498 Core DNA Replication Machinery Family AT5G22110 65.217 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03594 K02325 - zju:107419650 811.601