Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03577 ATGTTGGAAGTGTTTCCTTTCAGTGCCTTGTGTAAACCTGATTGTATCAACACATCATTGACTTGTAAAAAAGTAAAGCTTCAAGGACAAGGGTTGACCAGTGACAGAACAGTAAGATGCCTAACCAATGTGGAGGCATTTTCACTCCGCACTAAAGACATTGAAGAAGTGACAACTCTTTTCGCAAGATTCTTGAGGAGCCCTCGTGTTCAAGGAGTCATAAGGTATGAATCACCATATTGGAGATCACTTGCAGCAAACAGAATTCAGGTTGGATGGAGATACAGGAAGAAGCGTCTAAGTCGAGCTAATACCAAACAAAATGATTATCAAACATCGAAATCATAG 348 0.4023 MLEVFPFSALCKPDCINTSLTCKKVKLQGQGLTSDRTVRCLTNVEAFSLRTKDIEEVTTLFARFLRSPRVQGVIRYESPYWRSLAANRIQVGWRYRKKRLSRANTKQNDYQTSKS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03577 115 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 18 107 - -
Tsu06g03577 115 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 18 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03577 Tsu-Chr6 47138608 47139675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03577 33 104 Ion Channels AT4G30360 44.444 7.20e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03577 K05391 - mtr:MTR_6g075460 154.066