Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03573 ATGCTTCGATTCGATTCCATTGAACTTCGATTCAATTCAAAATTCGATTCAGAATCGTTCAACTTCAGGATCGTTCTCTCAAGCTTCGATTCGGTTTCTCAGCAAAACCATGAAATCTTTCTCAGCTTCTCCAGCAAAGCTTCAATTTGGAATCTCTCGAACTTCAATTCAGTTTTGTTCATCCTTCAATCTAgTTTCAGGGGCACCGACACTCGCTACGGTTTTACAGGAAATCTTTACAGAGCTCTATGTGACGGTGGAGTTCACACCTTCATTGATGATAGAGAGCTTCATGGAGGTGACGAAATCACACCATCACTTGTCAAAGCCATCGAAGAGTCTAGAATTTTCATTCCAGTCTTCTCTGTCAATTATGCTTTTTCTTCGTTTTGTTTGGACGAACTTGTTCACATAATTCACTGTTTTAAGACAAAGGGTTGCTTGGTTTTGCCGATTTTCTATGATGTGGAACCTACTCACGTTCGACATGAGACTGAGAGTTATGGTGAAGCAATAGCTATGCATGAAAAGGTGtttcaaaataacaaagaaaagTACAACGATAACATGGAGAGGCTATATAAATGGAAGATGGCTCTTAACCAAGCAGCAAACTTGTCCGGATACCATTTCAATCCTAGGAATGGATATGAATATGAGTTTATTCGAgaaatagtcaaatatgtaTCCAAGAAGATTAATCGCGCACCTTTATATGTTGTTGATCACCCCATTGGCCTGCAGTGTCGTGTCCTAAAAGTAACTTCACTTTTGAAAGTTGGATCTAATGATGAAGTCAAGATGCTAGGGATTTATGGACCTGGAGGAATGGGCAAGACAACTCTCGCACGAGCGGTTTATAACACCATTGCCGATCAATTTGAATATCTGTGTTTTCTTCACAAAGTGAGAGAAAATTCAACAAAACATGGTTTAGAGCATCTCCAAAAGGAGTTTCTTTCCAAAACTATTGGCTTGGATATTAAGTTAGGAGATAGTAGTGAGGGAATTCCAATCATAAAGCAAAGGCTACACCGAAAGAAGGTTCTATTGATGCTCGATGACGTTGACGAATTGAAGCAACTGCAGGTTTTGGCTGGAGGGATTGATTGGTTTTGTGTTGGCAGTAGAGTGATCGTTACAACTCGAGACAAAGATTTGCTAGCATGTCATGACATTGAAGTGACATATGAAATAGACGAGTTAAATACGAATGAAGCTCTTGAATTGCTCAAGTGGAAGGCATTTAAAAGTAAGCAAGTTGATTCATGTTATGAGCACATTTTAAACCGTGCAGTAAATTATGCTTCTGGCCTTCCACTGGCGTTAGAAATATTAGGTTCCAACTTATTTGGAAAGCATATAAAAGAATGGAATTCTTTGTTGGATCGATGTGAAAGGATTCCTAACAAAGAGATTCAAAAGATACTTAAAGTGAGTTTTGATGCTTTGGAGGAAGATGAGCAGAGTATTTTTCTCGACATTGCTTGCTGCTTTAAAGGGTATCAATTGAATGAGGTGGAAGATATTCTTTGTGCTCATTATGGTCAATGCATGAAATATCATATTGGAGTGTTGGTTGAAAAATCTCTCCTAAAAATTTGTTGGCAGGGTTATGTGACATTACATGACTTGATAGAGGTCATGGGTAAAGAAATTGTAAGACAAGAATCACCAAAAGAGCCTGGGAAACGCAGCAGGTTGTGGTTCCATGAGGATATATTTcaagttttagaagaaaattcGGGGACAAGTCAAATTGAAATTATACATTTGGATTTTCCAATACCTGAAGAAGTAGTAGAATGGAAAGGAGATGAattcaagaagatgaaaaatctCAAAACACTTGTTGTTAAAACTAGTTTATTTGTTAAGCCTAATTTACATCTTCCTAATAGTTTAAGAGCACTGGAATGGCCTAGGTATCCTTCACAACATATACCATCGGATTTTTGTCCGAAGAATCTTTCGATATGCAAGTTACCCAACAGTGGCCTTACATCATTTAATTTGGCTAACTCATTGAAGGAAAGGACGTTCTTGGGTATGAAAGTTTTACATCTAGACAATTCTGAATGTTTAACAGAAATAATTGACGTATCTAGTCTACAAAATTTAGAAGAATTTTCATTTCAAAGGTGTGAGAATTTACTTACAATTCATGATTCTATTGGGTTCCTGAATAAACTTAAAATCTTGAAAGCTAAAGGACATCGAATGTTGATTAGGTTACCAAGTTGCATTCTCATGATGCCGAAATTGTATCACATTTGTCTTTGTGGCTATCATCTTTTGCCAAACCAGAGTGATAAACCAAGTTCCATGGTGTCCTCAAAAGTAAAATCTCTTGGGCTTAGAAAATGCAACCTAACAGATGAATCTCTTCCAATAATTCTCAAGTTGTTTTCTAATGTGACACACTTAGACTTATCGATGAGTAATTTCACAATTCTTCCAGAATGCATCAAAGAACATCACTCTTTAAGGAGCCTATGTCTGGATGATTGCAAGTGTCTTCAAGAAATTAGAGGAATTCCGCCAAATTTAAAATACTTGTCTGCATTAACTTGTGAATCTTTGAGTTTCTCATGCAGAAGCATGCTACTGAACCAGGAACTGCATGAAGCTGGAGGAACCATGTTTTGTTTGCCAGGAACTGCATGGATTCCAGAGTGGTTTGAGCACCAAAGTAAGGGACGGTCAACTTCTTTCTGGTTTCGTAACAACATCCCTTCCATTTCCCTCTTCGTCACTAGTAAATTGAAACATCCCGACAGCAGATTACTTTATTCATCAATTGTTGGTCTTATCATTAATGGCTATAAACTTGATCTTCGCTGTCCGTTTGATGGTCTTCTTCGCTGGATGTCACTAGATCATACATATCTATTTGATTTACATCTACAAGACATGGAACCTAGCTGGAAATTAGGCATATCTACCCCAGAGGAAGACCAGGAACAAAAACCTAAACTGGCCAAAGCacttttgaaaaatgaatggAACCATGCAGAGATTACGTGTGAAAATAAGGAGACAATTCCACTCCTTATAGAAATTGGAATCCACGTCTTCAAACAGAAAAGTAACATGGAGGATATTCAATTCACTGATCCtaataaaaatagagaaaattaa 3141 0.3655 MLRFDSIELRFNSKFDSESFNFRIVLSSFDSVSQQNHEIFLSFSSKASIWNLSNFNSVLFILQSSFRGTDTRYGFTGNLYRALCDGGVHTFIDDRELHGGDEITPSLVKAIEESRIFIPVFSVNYAFSSFCLDELVHIIHCFKTKGCLVLPIFYDVEPTHVRHETESYGEAIAMHEKVFQNNKEKYNDNMERLYKWKMALNQAANLSGYHFNPRNGYEYEFIREIVKYVSKKINRAPLYVVDHPIGLQCRVLKVTSLLKVGSNDEVKMLGIYGPGGMGKTTLARAVYNTIADQFEYLCFLHKVRENSTKHGLEHLQKEFLSKTIGLDIKLGDSSEGIPIIKQRLHRKKVLLMLDDVDELKQLQVLAGGIDWFCVGSRVIVTTRDKDLLACHDIEVTYEIDELNTNEALELLKWKAFKSKQVDSCYEHILNRAVNYASGLPLALEILGSNLFGKHIKEWNSLLDRCERIPNKEIQKILKVSFDALEEDEQSIFLDIACCFKGYQLNEVEDILCAHYGQCMKYHIGVLVEKSLLKICWQGYVTLHDLIEVMGKEIVRQESPKEPGKRSRLWFHEDIFQVLEENSGTSQIEIIHLDFPIPEEVVEWKGDEFKKMKNLKTLVVKTSLFVKPNLHLPNSLRALEWPRYPSQHIPSDFCPKNLSICKLPNSGLTSFNLANSLKERTFLGMKVLHLDNSECLTEIIDVSSLQNLEEFSFQRCENLLTIHDSIGFLNKLKILKAKGHRMLIRLPSCILMMPKLYHICLCGYHLLPNQSDKPSSMVSSKVKSLGLRKCNLTDESLPIILKLFSNVTHLDLSMSNFTILPECIKEHHSLRSLCLDDCKCLQEIRGIPPNLKYLSALTCESLSFSCRSMLLNQELHEAGGTMFCLPGTAWIPEWFEHQSKGRSTSFWFRNNIPSISLFVTSKLKHPDSRLLYSSIVGLIINGYKLDLRCPFDGLLRWMSLDHTYLFDLHLQDMEPSWKLGISTPEEDQEQKPKLAKALLKNEWNHAEITCENKETIPLLIEIGIHVFKQKSNMEDIQFTDPNKNREN 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03573 1046 PRINTS Disease resistance protein signature 343 357 - -
Tsu06g03573 1046 PRINTS Disease resistance protein signature 268 283 - -
Tsu06g03573 1046 PRINTS Disease resistance protein signature 436 450 - -
Tsu06g03573 1046 PRINTS Disease resistance protein signature 702 718 - -
Tsu06g03573 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 495 IPR027417 -
Tsu06g03573 1046 SUPERFAMILY L domain-like 554 957 - -
Tsu06g03573 1046 CDD AAA 271 402 - -
Tsu06g03573 1046 Pfam TIR domain 60 235 IPR000157 GO:0007165
Tsu06g03573 1046 PANTHER ARCHAEAL ATPASE 69 1009 - -
Tsu06g03573 1046 Gene3D Ribonuclease Inhibitor 585 884 IPR032675 -
Tsu06g03573 1046 ProSiteProfiles TIR domain profile. 58 233 IPR000157 GO:0007165
Tsu06g03573 1046 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 69 1009 IPR044974 GO:0006952
Tsu06g03573 1046 SMART till_3 36 206 IPR000157 GO:0007165
Tsu06g03573 1046 SUPERFAMILY Toll/Interleukin receptor TIR domain 65 209 IPR035897 -
Tsu06g03573 1046 Gene3D - 401 485 IPR042197 -
Tsu06g03573 1046 Gene3D - 233 395 IPR027417 -
Tsu06g03573 1046 SUPERFAMILY "Winged helix" DNA-binding domain 471 579 IPR036390 -
Tsu06g03573 1046 Pfam NB-ARC domain 263 482 IPR002182 GO:0043531
Tsu06g03573 1046 Gene3D - 64 232 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03573 Tsu-Chr6 47076559 47116701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03573 72 856 WRKY Transcription Factor Family AT4G12020 28.963 1.63e-63 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03573 - - mtr:MTR_6g008140 962.985