Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03525 ATGTCGAAAGCTTCTCCAACAACTATACCACCATACGCCATGTCTTATAGTTATGTTGTCCCGAGAAGTTTCCTTACCAATACGATCACTATCACTCCGCCTCGAGAACTATCTAATGAATATCCGTTGCATTCAGATCTAGTAAGTGAAAAGAACATGGAAGAGAAGACTGTCGAGAGGAAGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCGCGTTCAAGAGCAAGGAAACAgTTCAAAGTCTCTCGTCTGGAAGAGGAAAATGAAAAGCTGAGGAGGGAGAAGATTGAAGGATCTAGAGATACATATCATTTGTTGTGGGATGTCCTCTGGAAGGAAAAATTGCTCCAGCAAAAGTAG 366 0.4235 MSKASPTTIPPYAMSYSYVVPRSFLTNTITITPPRELSNEYPLHSDLVSEKNMEEKTVERKQKRMIKNRESAARSRARKQFKVSRLEEENEKLRREKIEGSRDTYHLLWDVLWKEKLLQQK 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03525 121 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 97 IPR004827 GO:0003700|GO:0006355
Tsu06g03525 121 Coils Coil 76 103 - -
Tsu06g03525 121 SMART brlzneu 56 107 IPR004827 GO:0003700|GO:0006355
Tsu06g03525 121 Gene3D - 58 105 - -
Tsu06g03525 121 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 53 101 IPR043452 GO:0003700|GO:0045893
Tsu06g03525 121 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
Tsu06g03525 121 MobiDBLite consensus disorder prediction 51 78 - -
Tsu06g03525 121 SUPERFAMILY Leucine zipper domain 60 102 IPR046347 GO:0003700|GO:0006355
Tsu06g03525 121 Pfam bZIP transcription factor 60 96 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03525 Tsu-Chr6 46391774 46394043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03525 55 98 bZIP Transcription Factor Family AT2G41070 78.431 1.01e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu06g03525 bZIP_1 4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03525 K14432 - psom:113310787 73.1738