Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03514 ATGATGAACACTCTAATCCAAATTTGGAGATGGGTTATGCAGCCAAAGGTGTGGAGATATGTGGGTTTTGTTTCAGCTGTTATTGGACTGCTCTGTTATGGTCTCAGGCTCTCAGCTCTTCCTTCAACTATTTCTTTGGAGATTGGAATTTCTTGTAGATTTTTCTCTATAGCATTTTCAGCGTCGTCATCAGCTTCATCACTTTATTTGCATGCAAATGGCAACGCTCAACAAGTCGTTGGTTCAAAAAATAATGTAAATGAAGCTGAGTCACATTCACTACAATTGGCCAGTTCTGTTGATAATGAAGATCTTACTagtcttcaaaatgaaaatctgaatagtatTCTGGAAAAACTTGGTGATTATATGAAGGCACTTCAGCAAGAAAATTCAACTCTCATCGAAATGCTTATGGAGAAGTTGAAAGATTACCTAAGTGATGATTCTGGATTAGATGGGTTTGACCTTGGCCCTGACCCAGACTTCATGATCAAGGCCTTGCCAACTGAAATAATCGACAACCTTCACAAAATAGCAAAGTTGATGGTTAGTGCCGGGTTTAAGAGTGAATTCTCGGACGTGTATAGCAGTTCCAGGAGGGAATGTTTGGTCGAAAGCCTCTCAAGATTAGGGTTCAAGAAACTCAAcattaatgaaaatgaagacTGTCAGATGTTGGCACCGGAAGTAATGGAAGATGAGAGTGAAAGATGGATCAAAGTTTCCAACGTGGCTTACAAGATATTGTTACCTACTGAGCGGAAACCCTGCGATCGAGTTTTCTTTGGGTTCTCATCCAGTGCTGATTTATCATTTATGGATGTTTGCGGGGAATCCATAGATGACCTGGTGGACTTTTCCGACTATCTTAACCCATCACAAGAGGAGTGGCGTAGAGCCACCAACATATTTAAAACAATGTTTGACCTAGTTCCAGAGTCTATGTCCGGTGATCAATCCTTTGTGGTGAAAAATGAATTCGCCTAA 990 0.3909 MMNTLIQIWRWVMQPKVWRYVGFVSAVIGLLCYGLRLSALPSTISLEIGISCRFFSIAFSASSSASSLYLHANGNAQQVVGSKNNVNEAESHSLQLASSVDNEDLTSLQNENLNSILEKLGDYMKALQQENSTLIEMLMEKLKDYLSDDSGLDGFDLGPDPDFMIKALPTEIIDNLHKIAKLMVSAGFKSEFSDVYSSSRRECLVESLSRLGFKKLNINENEDCQMLAPEVMEDESERWIKVSNVAYKILLPTERKPCDRVFFGFSSSADLSFMDVCGESIDDLVDFSDYLNPSQEEWRRATNIFKTMFDLVPESMSGDQSFVVKNEFA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03514 329 Pfam Exo70 exocyst complex subunit 237 307 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu06g03514 329 Gene3D Exocyst complex component Exo70 80 329 - -
Tsu06g03514 329 PANTHER EXOCYST COMPLEX PROTEIN EXO70 27 314 IPR004140 GO:0000145|GO:0006887
Tsu06g03514 329 SUPERFAMILY Cullin repeat-like 115 308 IPR016159 -
Tsu06g03514 329 Coils Coil 110 130 - -
Tsu06g03514 329 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 27 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03514 Tsu-Chr6 46299017 46300281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03514 160 327 EXO70 exocyst subunit family AT5G58430 49.425 9.82e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03514 K07195 - mtr:MTR_5g073620 168.318