Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g03473 | ATGGAGCTTGAAGTCTTGGTAAAGAGCTACATTTTGAGTTTCAGAGGCGAGGATACTCGCTATGGTTTCACCGGCAATCTCAAGAAAGCTCTTGATGACAAAGGAGTCAGAACTTTCATGGATGACAAGGAGCTTCAAAAAGGGGATGAAATTACACCATCACTGCTCAAGGCAATTGAAGACTCTAAAATCGCCATCGTTGTCCTCTCTAAGAATTATGCTTCTTCCTCTTTTTGTTTACAAGAACTTTCTAAGATCCTTGAGTCCATGAAAGATAAGGACTTAGGTCGTTCTGTTTTGCCGGTATTTTATAAGGTGGATCCTTCTGATGTAAGAAAGTTGAAAAGGACTTATGGAGAAGCGATGGATAAACATGATGAGGCCAGCTCCTCCACTCATGACATGAATAATAAATGGAGAGCGGCTCTTCACCAAGTTGCTAATTTGTCTGGATTTCATTACAAGAAAGGGGATGGATATGAGCACGAGTTTATTGGGAAGATCGTTGAACAAGTCTTAAGAAAGATAAAACCCGTCACTTTACCCGTTGATGATCACCTAGTTGGATTAGAGCCCCGAAAGGAACATGTATTGTCACTTTTGAACGTTGGGTATGATAATAGAGTCTACATGGTGGGGATCCATGGTATTGGTGGAATAGGAAAAACAACTCTTGCACTAGACGTTTTTAATTCGATTGCCCATCAATTTGAAAGTTCATGTTTTCTTGAAAATGTTAGAGAAAATTCTGAGAAACATGGGTTGCCATATCTCCAAACAATCATTCTTTCTAAAGTAGTTGGGGAGAAAATTGAGTTAACAGGTGTTCGACAAGGAATTGCAGTGTTAGAACAAAGGCTTCGACAAAAGAAGTGTCTTTTGGTTCTAGATGATGTTAACGAACAGGAGCAATTACAAGCTATTGCTGGAAGACATGAGTGGTTTGGTCCTGCAAGTCGAGTCATCATCACAACTCGGGACAAAAGGTTGCTAACATGTCATGGAGTTGAAAGCACTTTTGAGGTGAAAGAGTTGAACCAGAACGATGCTTTTGAATTGCTTAGACGGAAAGCTTTTAAGGCTGAAGAAGTTAGTTCAGATTTTAAGGATGTTTTAAAACGTGCCATAACTTATGCTTCTGGGCTTCCATTGGCTTTAGAAGTAATAGGTTCTCACTTATTTAATAAAACATTAGAACAATGTAATTTTGCTCTAGATCGTTATAAAAGGAGGATTCCTGACAAAAAGATACAAATGATACTACAAATAAGCTTTGATGCTTTGAGTATAGAAGAGAAGAGTGTTTTTCTTGACATTTCCTGTTGCTTCAAAGGATATAAATTAGCAAAGGTCGAAAAACTACTTCATGCTCATCATGGTGACAGCAAGAAAGATCACATCAATGTGCTAGTTGAAAAATCTCTCATAAAGATAAATGAGTCTGATATTGTTACATTACATGATCTAATAGAGGACATGGGCAAAGAAATTGTCAGACAAGAATCACCGGAAGAGCCTGGAAAACGCAGTAGGTTATGGCACTCCAAAGATATAGTTCACGTTTTAGAAGAAAATGCGgGAACAAGTAAAATTCAAATCATATGTTTGCATCGTCGGATGATTAAAGTAAAATGGGATGGAGAAGCATTCAAGAAGATGGAAAATCTCAAAACACTAGTTCTTCGTCATAGTAATTTTTCTGAATGTCCCAAACATCTTCCAAATAGTCTAAGAGTACTTGAATGGTTGTCATATCCTCCAGGGGACTTACCATCTGGTTTTTATCCGAAGAAACTTGCCATATGCAACTTTGGCTATGGACCATTTTGTTGTGATGTCTTTCACAAGAAGATACCTGACCTGTCAATTAATTGGGAAGATTTCCTCAAACAGAAGTTTGAGAATATGAgaattttaaatattgaataCTATAAACCTTTAACACAAATACCTGACCTATCAAGTCTCCGAAATTTAGAAGAACTTTCATTTAGAAGTTGTGACAATCTAattacaattgacaaatcggtTGGTTTTCTATGTAAACTTAAAATCTTGAGAGTTATGCATTGTAGCAAAATCCAGAGAGTTCCACCTCTCATGTTAACTTCTCTAGAAGAACTCAATCTTTCATTTTGTACTAACCTTCATAGTTTTCCACATGTGGTAGATGGGTTTTTGGGTAAACTTAAGACCATGAGTCTTATAAGTTGTGTTAAGCTTAGGAGAATTCCACCTCTCAAGTTGGCCTTTCTAGAAAATCTCGATCTTTCAAATTGTTCTTGTCTTGAGAGTTTTCCAGATGTGGTAGATGGGTTTCTGGGTAAACTTAAAACCATGAATCTTAAAAGTTGTGACAAGCTAAGGAGTATTCAACCTCTTAAGTTGACTTCGCTAGAAAAACTCGATCTTTCATATTGTTCAAGTCTCGAGAATTTTCCACTTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCCTGCTTGTTGAAAGTTGTTATAATCTTACGAGTATTCCACCTCTCAAGTTAGATTCTTTAGAAGAACTTGACCTTTCACGTTGCTATAGCCTTGAGAGTTTTCCACTTGTGGTGGACGGGTTTCTTGGCAAACTTAAAACCCTGCTTGTTAGAAGCTGTCACAATCTCAGGAGTATTCCACCTCTCAAGTTGGATTCTTTAGAAAAACTTGACCTTTCATACTGTTATAATCTTGAGAGATTTCCATGTGTGGTGGATGGGTTTCTGGATAAACTTAAATTCCTCTGTATGCATCGTTGCATCATGCTTGGGAGTATCCCACCACTGAGGTTGACTTCGTTGGAAGAATTCGATCTTTCATATTGTCTAAGTCTAGACAGTTTTCCAAAAATACTGGGAGAGATAAGAAATATAACCAAGCTCAACATGGATATAACTTTAACTGCCATAAAAGAATTTCCGTTTCCATTTCAAAATCTTCCTCCACCTCCAACATCATATCCTTGTAACTGTGGAATTGTTAGTTTACCAAATAGAGTTGCTGCGTTGTCAATGCTGGCTGAATGGACCATCCAAGCTGAAAAAAAAGTGAGCCCAATGCAATCATCACACGTAGAATATATTTGTCTCAGGAACTGTGAAGTTTCAGATGAATATTTGTCAATCGGTCTCACGTTGTTTGCTAATGTGAAAGAACTACACCTAACTCAACATCGATTCAAAGTTCTTCCTAAATCTAtagaaaaatatcattttttaagGAGGCTTGTCTTGGATGATTGTGAGGAACTTCAGGAAATTAAAGGGATTCCTCCATGCTTAAAAACATTATCTGCTTTAAACTGCAAATCATTGACTTCGTTGTGTAAAAGCAAATTACTAAATCAGGAATTACATGAGGCTGGAAACACTTGGTTGCGTTTGCCACGAGCAAATATTCCAAAGTGGTTCGACCACCAATGCTTGGCAGGATCGTCAATTTCTTTCTGGTTTCGAAACAAGTTTCCTGCCATAGCTCTCTGTGTTGTTTCTCCATTGACATTGGACGATTCTCGGCGTCATGTAAGAGTGATCATTAATGGCAAAACATTTTTCTATATATGTGATGATACGAGACATAAATCACAGGCTAAAATGTATCATTTACAtctttttcatatgaaaatggAAAACTTCAATGATATTATCGACAAAGCTTTTTTGGAAAATAAGTGGAACCATGCAGAGGTTGACTTTGGATTCCCATTCATGAACAGCGGAGTCCATGTATTGAAAGAGAAAAGTAGCATGAATGATATTCGATTCACCAACCCAGAGAATGATGTGTGA | 3807 | 0.3688 | MELEVLVKSYILSFRGEDTRYGFTGNLKKALDDKGVRTFMDDKELQKGDEITPSLLKAIEDSKIAIVVLSKNYASSSFCLQELSKILESMKDKDLGRSVLPVFYKVDPSDVRKLKRTYGEAMDKHDEASSSTHDMNNKWRAALHQVANLSGFHYKKGDGYEHEFIGKIVEQVLRKIKPVTLPVDDHLVGLEPRKEHVLSLLNVGYDNRVYMVGIHGIGGIGKTTLALDVFNSIAHQFESSCFLENVRENSEKHGLPYLQTIILSKVVGEKIELTGVRQGIAVLEQRLRQKKCLLVLDDVNEQEQLQAIAGRHEWFGPASRVIITTRDKRLLTCHGVESTFEVKELNQNDAFELLRRKAFKAEEVSSDFKDVLKRAITYASGLPLALEVIGSHLFNKTLEQCNFALDRYKRRIPDKKIQMILQISFDALSIEEKSVFLDISCCFKGYKLAKVEKLLHAHHGDSKKDHINVLVEKSLIKINESDIVTLHDLIEDMGKEIVRQESPEEPGKRSRLWHSKDIVHVLEENAGTSKIQIICLHRRMIKVKWDGEAFKKMENLKTLVLRHSNFSECPKHLPNSLRVLEWLSYPPGDLPSGFYPKKLAICNFGYGPFCCDVFHKKIPDLSINWEDFLKQKFENMRILNIEYYKPLTQIPDLSSLRNLEELSFRSCDNLITIDKSVGFLCKLKILRVMHCSKIQRVPPLMLTSLEELNLSFCTNLHSFPHVVDGFLGKLKTMSLISCVKLRRIPPLKLAFLENLDLSNCSCLESFPDVVDGFLGKLKTMNLKSCDKLRSIQPLKLTSLEKLDLSYCSSLENFPLVVDGFLGKLKTLLVESCYNLTSIPPLKLDSLEELDLSRCYSLESFPLVVDGFLGKLKTLLVRSCHNLRSIPPLKLDSLEKLDLSYCYNLERFPCVVDGFLDKLKFLCMHRCIMLGSIPPLRLTSLEEFDLSYCLSLDSFPKILGEIRNITKLNMDITLTAIKEFPFPFQNLPPPPTSYPCNCGIVSLPNRVAALSMLAEWTIQAEKKVSPMQSSHVEYICLRNCEVSDEYLSIGLTLFANVKELHLTQHRFKVLPKSIEKYHFLRRLVLDDCEELQEIKGIPPCLKTLSALNCKSLTSLCKSKLLNQELHEAGNTWLRLPRANIPKWFDHQCLAGSSISFWFRNKFPAIALCVVSPLTLDDSRRHVRVIINGKTFFYICDDTRHKSQAKMYHLHLFHMKMENFNDIIDKAFLENKWNHAEVDFGFPFMNSGVHVLKEKSSMNDIRFTNPENDV | 1268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g03473 | 1268 | PRINTS | Disease resistance protein signature | 211 | 226 | - | - | |
Tsu06g03473 | 1268 | PRINTS | Disease resistance protein signature | 794 | 810 | - | - | |
Tsu06g03473 | 1268 | PRINTS | Disease resistance protein signature | 286 | 300 | - | - | |
Tsu06g03473 | 1268 | PRINTS | Disease resistance protein signature | 379 | 393 | - | - | |
Tsu06g03473 | 1268 | PANTHER | ARCHAEAL ATPASE | 823 | 1239 | - | - | |
Tsu06g03473 | 1268 | PANTHER | ARCHAEAL ATPASE | 18 | 849 | - | - | |
Tsu06g03473 | 1268 | Gene3D | Ribonuclease Inhibitor | 749 | 914 | IPR032675 | - | |
Tsu06g03473 | 1268 | Gene3D | Ribonuclease Inhibitor | 515 | 748 | IPR032675 | - | |
Tsu06g03473 | 1268 | SUPERFAMILY | "Winged helix" DNA-binding domain | 415 | 523 | IPR036390 | - | |
Tsu06g03473 | 1268 | Pfam | TIR domain | 9 | 179 | IPR000157 | GO:0007165 | |
Tsu06g03473 | 1268 | SUPERFAMILY | L domain-like | 821 | 1132 | - | - | |
Tsu06g03473 | 1268 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 823 | 1239 | IPR044974 | GO:0006952 | |
Tsu06g03473 | 1268 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 18 | 849 | IPR044974 | GO:0006952 | |
Tsu06g03473 | 1268 | Gene3D | - | 344 | 429 | IPR042197 | - | |
Tsu06g03473 | 1268 | Pfam | C-JID domain | 1134 | 1249 | IPR045344 | - | |
Tsu06g03473 | 1268 | ProSiteProfiles | TIR domain profile. | 6 | 176 | IPR000157 | GO:0007165 | |
Tsu06g03473 | 1268 | SMART | till_3 | 7 | 149 | IPR000157 | GO:0007165 | |
Tsu06g03473 | 1268 | SUPERFAMILY | L domain-like | 500 | 861 | - | - | |
Tsu06g03473 | 1268 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 439 | IPR027417 | - | |
Tsu06g03473 | 1268 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 12 | 152 | IPR035897 | - | |
Tsu06g03473 | 1268 | Pfam | NB-ARC domain | 195 | 405 | IPR002182 | GO:0043531 | |
Tsu06g03473 | 1268 | Gene3D | - | 10 | 173 | IPR035897 | - | |
Tsu06g03473 | 1268 | Gene3D | - | 174 | 338 | IPR027417 | - | |
Tsu06g03473 | 1268 | Gene3D | Ribonuclease Inhibitor | 935 | 1141 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g03473 | Tsu-Chr6 | 45747662 | 45756432 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g03473 | 774 | 980 | WRKY Transcription Factor Family | AT4G12020 | 31.925 | 1.58e-06 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g03473 | - | - | mtr:MTR_6g079140 | 1523.06 |