Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03473 ATGGAGCTTGAAGTCTTGGTAAAGAGCTACATTTTGAGTTTCAGAGGCGAGGATACTCGCTATGGTTTCACCGGCAATCTCAAGAAAGCTCTTGATGACAAAGGAGTCAGAACTTTCATGGATGACAAGGAGCTTCAAAAAGGGGATGAAATTACACCATCACTGCTCAAGGCAATTGAAGACTCTAAAATCGCCATCGTTGTCCTCTCTAAGAATTATGCTTCTTCCTCTTTTTGTTTACAAGAACTTTCTAAGATCCTTGAGTCCATGAAAGATAAGGACTTAGGTCGTTCTGTTTTGCCGGTATTTTATAAGGTGGATCCTTCTGATGTAAGAAAGTTGAAAAGGACTTATGGAGAAGCGATGGATAAACATGATGAGGCCAGCTCCTCCACTCATGACATGAATAATAAATGGAGAGCGGCTCTTCACCAAGTTGCTAATTTGTCTGGATTTCATTACAAGAAAGGGGATGGATATGAGCACGAGTTTATTGGGAAGATCGTTGAACAAGTCTTAAGAAAGATAAAACCCGTCACTTTACCCGTTGATGATCACCTAGTTGGATTAGAGCCCCGAAAGGAACATGTATTGTCACTTTTGAACGTTGGGTATGATAATAGAGTCTACATGGTGGGGATCCATGGTATTGGTGGAATAGGAAAAACAACTCTTGCACTAGACGTTTTTAATTCGATTGCCCATCAATTTGAAAGTTCATGTTTTCTTGAAAATGTTAGAGAAAATTCTGAGAAACATGGGTTGCCATATCTCCAAACAATCATTCTTTCTAAAGTAGTTGGGGAGAAAATTGAGTTAACAGGTGTTCGACAAGGAATTGCAGTGTTAGAACAAAGGCTTCGACAAAAGAAGTGTCTTTTGGTTCTAGATGATGTTAACGAACAGGAGCAATTACAAGCTATTGCTGGAAGACATGAGTGGTTTGGTCCTGCAAGTCGAGTCATCATCACAACTCGGGACAAAAGGTTGCTAACATGTCATGGAGTTGAAAGCACTTTTGAGGTGAAAGAGTTGAACCAGAACGATGCTTTTGAATTGCTTAGACGGAAAGCTTTTAAGGCTGAAGAAGTTAGTTCAGATTTTAAGGATGTTTTAAAACGTGCCATAACTTATGCTTCTGGGCTTCCATTGGCTTTAGAAGTAATAGGTTCTCACTTATTTAATAAAACATTAGAACAATGTAATTTTGCTCTAGATCGTTATAAAAGGAGGATTCCTGACAAAAAGATACAAATGATACTACAAATAAGCTTTGATGCTTTGAGTATAGAAGAGAAGAGTGTTTTTCTTGACATTTCCTGTTGCTTCAAAGGATATAAATTAGCAAAGGTCGAAAAACTACTTCATGCTCATCATGGTGACAGCAAGAAAGATCACATCAATGTGCTAGTTGAAAAATCTCTCATAAAGATAAATGAGTCTGATATTGTTACATTACATGATCTAATAGAGGACATGGGCAAAGAAATTGTCAGACAAGAATCACCGGAAGAGCCTGGAAAACGCAGTAGGTTATGGCACTCCAAAGATATAGTTCACGTTTTAGAAGAAAATGCGgGAACAAGTAAAATTCAAATCATATGTTTGCATCGTCGGATGATTAAAGTAAAATGGGATGGAGAAGCATTCAAGAAGATGGAAAATCTCAAAACACTAGTTCTTCGTCATAGTAATTTTTCTGAATGTCCCAAACATCTTCCAAATAGTCTAAGAGTACTTGAATGGTTGTCATATCCTCCAGGGGACTTACCATCTGGTTTTTATCCGAAGAAACTTGCCATATGCAACTTTGGCTATGGACCATTTTGTTGTGATGTCTTTCACAAGAAGATACCTGACCTGTCAATTAATTGGGAAGATTTCCTCAAACAGAAGTTTGAGAATATGAgaattttaaatattgaataCTATAAACCTTTAACACAAATACCTGACCTATCAAGTCTCCGAAATTTAGAAGAACTTTCATTTAGAAGTTGTGACAATCTAattacaattgacaaatcggtTGGTTTTCTATGTAAACTTAAAATCTTGAGAGTTATGCATTGTAGCAAAATCCAGAGAGTTCCACCTCTCATGTTAACTTCTCTAGAAGAACTCAATCTTTCATTTTGTACTAACCTTCATAGTTTTCCACATGTGGTAGATGGGTTTTTGGGTAAACTTAAGACCATGAGTCTTATAAGTTGTGTTAAGCTTAGGAGAATTCCACCTCTCAAGTTGGCCTTTCTAGAAAATCTCGATCTTTCAAATTGTTCTTGTCTTGAGAGTTTTCCAGATGTGGTAGATGGGTTTCTGGGTAAACTTAAAACCATGAATCTTAAAAGTTGTGACAAGCTAAGGAGTATTCAACCTCTTAAGTTGACTTCGCTAGAAAAACTCGATCTTTCATATTGTTCAAGTCTCGAGAATTTTCCACTTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCCTGCTTGTTGAAAGTTGTTATAATCTTACGAGTATTCCACCTCTCAAGTTAGATTCTTTAGAAGAACTTGACCTTTCACGTTGCTATAGCCTTGAGAGTTTTCCACTTGTGGTGGACGGGTTTCTTGGCAAACTTAAAACCCTGCTTGTTAGAAGCTGTCACAATCTCAGGAGTATTCCACCTCTCAAGTTGGATTCTTTAGAAAAACTTGACCTTTCATACTGTTATAATCTTGAGAGATTTCCATGTGTGGTGGATGGGTTTCTGGATAAACTTAAATTCCTCTGTATGCATCGTTGCATCATGCTTGGGAGTATCCCACCACTGAGGTTGACTTCGTTGGAAGAATTCGATCTTTCATATTGTCTAAGTCTAGACAGTTTTCCAAAAATACTGGGAGAGATAAGAAATATAACCAAGCTCAACATGGATATAACTTTAACTGCCATAAAAGAATTTCCGTTTCCATTTCAAAATCTTCCTCCACCTCCAACATCATATCCTTGTAACTGTGGAATTGTTAGTTTACCAAATAGAGTTGCTGCGTTGTCAATGCTGGCTGAATGGACCATCCAAGCTGAAAAAAAAGTGAGCCCAATGCAATCATCACACGTAGAATATATTTGTCTCAGGAACTGTGAAGTTTCAGATGAATATTTGTCAATCGGTCTCACGTTGTTTGCTAATGTGAAAGAACTACACCTAACTCAACATCGATTCAAAGTTCTTCCTAAATCTAtagaaaaatatcattttttaagGAGGCTTGTCTTGGATGATTGTGAGGAACTTCAGGAAATTAAAGGGATTCCTCCATGCTTAAAAACATTATCTGCTTTAAACTGCAAATCATTGACTTCGTTGTGTAAAAGCAAATTACTAAATCAGGAATTACATGAGGCTGGAAACACTTGGTTGCGTTTGCCACGAGCAAATATTCCAAAGTGGTTCGACCACCAATGCTTGGCAGGATCGTCAATTTCTTTCTGGTTTCGAAACAAGTTTCCTGCCATAGCTCTCTGTGTTGTTTCTCCATTGACATTGGACGATTCTCGGCGTCATGTAAGAGTGATCATTAATGGCAAAACATTTTTCTATATATGTGATGATACGAGACATAAATCACAGGCTAAAATGTATCATTTACAtctttttcatatgaaaatggAAAACTTCAATGATATTATCGACAAAGCTTTTTTGGAAAATAAGTGGAACCATGCAGAGGTTGACTTTGGATTCCCATTCATGAACAGCGGAGTCCATGTATTGAAAGAGAAAAGTAGCATGAATGATATTCGATTCACCAACCCAGAGAATGATGTGTGA 3807 0.3688 MELEVLVKSYILSFRGEDTRYGFTGNLKKALDDKGVRTFMDDKELQKGDEITPSLLKAIEDSKIAIVVLSKNYASSSFCLQELSKILESMKDKDLGRSVLPVFYKVDPSDVRKLKRTYGEAMDKHDEASSSTHDMNNKWRAALHQVANLSGFHYKKGDGYEHEFIGKIVEQVLRKIKPVTLPVDDHLVGLEPRKEHVLSLLNVGYDNRVYMVGIHGIGGIGKTTLALDVFNSIAHQFESSCFLENVRENSEKHGLPYLQTIILSKVVGEKIELTGVRQGIAVLEQRLRQKKCLLVLDDVNEQEQLQAIAGRHEWFGPASRVIITTRDKRLLTCHGVESTFEVKELNQNDAFELLRRKAFKAEEVSSDFKDVLKRAITYASGLPLALEVIGSHLFNKTLEQCNFALDRYKRRIPDKKIQMILQISFDALSIEEKSVFLDISCCFKGYKLAKVEKLLHAHHGDSKKDHINVLVEKSLIKINESDIVTLHDLIEDMGKEIVRQESPEEPGKRSRLWHSKDIVHVLEENAGTSKIQIICLHRRMIKVKWDGEAFKKMENLKTLVLRHSNFSECPKHLPNSLRVLEWLSYPPGDLPSGFYPKKLAICNFGYGPFCCDVFHKKIPDLSINWEDFLKQKFENMRILNIEYYKPLTQIPDLSSLRNLEELSFRSCDNLITIDKSVGFLCKLKILRVMHCSKIQRVPPLMLTSLEELNLSFCTNLHSFPHVVDGFLGKLKTMSLISCVKLRRIPPLKLAFLENLDLSNCSCLESFPDVVDGFLGKLKTMNLKSCDKLRSIQPLKLTSLEKLDLSYCSSLENFPLVVDGFLGKLKTLLVESCYNLTSIPPLKLDSLEELDLSRCYSLESFPLVVDGFLGKLKTLLVRSCHNLRSIPPLKLDSLEKLDLSYCYNLERFPCVVDGFLDKLKFLCMHRCIMLGSIPPLRLTSLEEFDLSYCLSLDSFPKILGEIRNITKLNMDITLTAIKEFPFPFQNLPPPPTSYPCNCGIVSLPNRVAALSMLAEWTIQAEKKVSPMQSSHVEYICLRNCEVSDEYLSIGLTLFANVKELHLTQHRFKVLPKSIEKYHFLRRLVLDDCEELQEIKGIPPCLKTLSALNCKSLTSLCKSKLLNQELHEAGNTWLRLPRANIPKWFDHQCLAGSSISFWFRNKFPAIALCVVSPLTLDDSRRHVRVIINGKTFFYICDDTRHKSQAKMYHLHLFHMKMENFNDIIDKAFLENKWNHAEVDFGFPFMNSGVHVLKEKSSMNDIRFTNPENDV 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03473 1268 PRINTS Disease resistance protein signature 211 226 - -
Tsu06g03473 1268 PRINTS Disease resistance protein signature 794 810 - -
Tsu06g03473 1268 PRINTS Disease resistance protein signature 286 300 - -
Tsu06g03473 1268 PRINTS Disease resistance protein signature 379 393 - -
Tsu06g03473 1268 PANTHER ARCHAEAL ATPASE 823 1239 - -
Tsu06g03473 1268 PANTHER ARCHAEAL ATPASE 18 849 - -
Tsu06g03473 1268 Gene3D Ribonuclease Inhibitor 749 914 IPR032675 -
Tsu06g03473 1268 Gene3D Ribonuclease Inhibitor 515 748 IPR032675 -
Tsu06g03473 1268 SUPERFAMILY "Winged helix" DNA-binding domain 415 523 IPR036390 -
Tsu06g03473 1268 Pfam TIR domain 9 179 IPR000157 GO:0007165
Tsu06g03473 1268 SUPERFAMILY L domain-like 821 1132 - -
Tsu06g03473 1268 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 823 1239 IPR044974 GO:0006952
Tsu06g03473 1268 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 849 IPR044974 GO:0006952
Tsu06g03473 1268 Gene3D - 344 429 IPR042197 -
Tsu06g03473 1268 Pfam C-JID domain 1134 1249 IPR045344 -
Tsu06g03473 1268 ProSiteProfiles TIR domain profile. 6 176 IPR000157 GO:0007165
Tsu06g03473 1268 SMART till_3 7 149 IPR000157 GO:0007165
Tsu06g03473 1268 SUPERFAMILY L domain-like 500 861 - -
Tsu06g03473 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 439 IPR027417 -
Tsu06g03473 1268 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 152 IPR035897 -
Tsu06g03473 1268 Pfam NB-ARC domain 195 405 IPR002182 GO:0043531
Tsu06g03473 1268 Gene3D - 10 173 IPR035897 -
Tsu06g03473 1268 Gene3D - 174 338 IPR027417 -
Tsu06g03473 1268 Gene3D Ribonuclease Inhibitor 935 1141 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03473 Tsu-Chr6 45747662 45756432 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03473 774 980 WRKY Transcription Factor Family AT4G12020 31.925 1.58e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03473 - - mtr:MTR_6g079140 1523.06