Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03472 ATGAAGTATATACTTCCTAATGGTATGGAAGAGCTTGTGTATGAAGCCGGGTTTGAAGATCACCTTGGCAAAGCTGAAGAAAAGATCGAGATTTTGGAAAAGATTGTGCCAGACTGGCTTTGCAAGAAGTTGGTTTCTTCTGTTGACACTATGCACTGCGTCAAGAATGCGGTAGATTTGGAGTCAATTCGATCAAGACTTGTCAGCAATGTGACCAAAGGAGATGAGTGA 231 0.4199 MKYILPNGMEELVYEAGFEDHLGKAEEKIEILEKIVPDWLCKKLVSSVDTMHCVKNAVDLESIRSRLVSNVTKGDE 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03472 76 PANTHER DNA REPLICATION FACTOR CDT1 18 69 IPR045173 GO:0003677|GO:0030174|GO:0071163
Tsu06g03472 76 Gene3D - 8 74 IPR038090 -
Tsu06g03472 76 PANTHER EXPRESSED PROTEIN 18 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03472 Tsu-Chr6 45739636 45740966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03472 10 67 Core DNA Replication Machinery Family AT2G31270 38.710 9.86e-06 39.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03472 - K10727 mtr:MTR_6g079130 82.8037