Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03442 ATGAGTTTGTTCATTGACataacatttttatatattatcttGTTCTTTCTTTCATTGAACATAGTCTTGtgtattgaaattgaaatcaatgattttaatccacaagaaagagatGCTTTGTTAGTCATAAGAGATTCTTTAACTTCTTCTGTTAATTTGCATGGAAATTGGACAGGACCACCTTGTATAAACAACCTTAGTAGATGGTTTGGTATCACTTGTTCAAATTGGCATGTTGTTCATATTACAATTCAAGGTGTTAATCTTAGTGGCTATTTACCTTCAACATTTCTTCAAAACATAACTTTCTTGAGACAAATTGATTTTAGAAATAATTCACTTTTTGGAACATTGCCTAATTTAACAGGTTTGGTTTTCTTGGAAGAAGTTAAGTTTTCAGTTAATCATTTTTCAGGTTCAATTCCTTTGGAATATGTTGAATTGTTAAGTCTTAAAGTTTTGGAGTTACAAGAAAATTACTTAGATGGTGAAATTCCACCTTTTGATCAACCTTCATTGATAAGTTTCAATGTGTCATATAATCATTTGATAGGGAAAATTCCTGAAACTTCTTTGCTTCAAAGGTTTCCAAAAAGTTGTTTTGATGATAATTCTGATCTTTGTGGATTTCCATTGGATAAGTCATGTTCTGCTGAACCTCCTGCACCACCTCCTTTTGCTATTTCACCTAGTTCTTCAATGGAAGAAAATAAGAAGAGACTTCAAGTTTGGATTATTGCTTTGATTGTTATTGTTGCAgctgttttgtttctttttctggTGATTAttgctttcttcttttgtaAAAGACAAGCTAGAggaaatgaaagaagaagaaatgattCAGCAAGATATGTTTTTGGAGCATGGGCAAAGAAGATGGTATATAATGCAGGAAACAGTGAAGATTCTGAAAAATTAGGCCAATTAGAATTTTGCAACAAGAAATTTCAAGTTTTTGATATGGATGATTTATTAAGGGCATCAGCAGAAGTTCTAGGAAGAGGAGATTTTGGTGTTACATATAAAGCAACACTTGAAACAGGTAATACTGTTGCAGTAAAGAGACTTAGCTACATGAATGAATTGAACAAGAGGGAGTTTATTCAGCAAATGCAATTGTTAGGAGAAATTAAGCATGAAAATCTTGTTGAAATTATCTCCTTttatcattcagaagatcaaaagCTTGTCATATATGAACTTGTTTCTGATGGCACTTTGTTTGAACTCCTACATGAGGGTAGAGGAATTGGAAGAATACCTCTTGATTGGAATACAAGACTTGCAATTATCAAAGACATAGCAAAAGGTCTAGATTTCCTTCATCAATATTTGTCTTCTCACAAAGTTCCTCATGCAAACCTCAAATCATCAAATGTTTTAATCCATCAAGACAATCAAGGTTACCATTCAAAGCTCATAGACTATGGTTTCTTACCTTTACTCTCATCATccaagaaaaatgaagaaaagcTAGCAATTAGCAAGTCACCAGAATTTTTTAAAGGGAAAAAGTTGACACACAAAACTGATGTATATTGTTTTGGTATCATAATGCTAGAGATTATAACAGGAAAAATTCCTGGTCATATCTTAGGTGATGAAGTTGAAGAAGTAACAACTAATGATCTTTCAGATTGGGTAAGAACTGTTGTGAACAATGATTGGTCTACTGATATATTGGATTTGGAAATATTAGCAGAAAGAGAAGGACATGATGCAATGTTGAATTTAACTGAGATAGCTCTTGAGTGTACTGATATGATACCTGAGAATAGGCCTAAAATGAGTGTAGTGTTGaggaaaattgaagaaataGAGCAAATGATGAAAGAGAATGAATGA 1848 0.296 MSLFIDITFLYIILFFLSLNIVLCIEIEINDFNPQERDALLVIRDSLTSSVNLHGNWTGPPCINNLSRWFGITCSNWHVVHITIQGVNLSGYLPSTFLQNITFLRQIDFRNNSLFGTLPNLTGLVFLEEVKFSVNHFSGSIPLEYVELLSLKVLELQENYLDGEIPPFDQPSLISFNVSYNHLIGKIPETSLLQRFPKSCFDDNSDLCGFPLDKSCSAEPPAPPPFAISPSSSMEENKKRLQVWIIALIVIVAAVLFLFLVIIAFFFCKRQARGNERRRNDSARYVFGAWAKKMVYNAGNSEDSEKLGQLEFCNKKFQVFDMDDLLRASAEVLGRGDFGVTYKATLETGNTVAVKRLSYMNELNKREFIQQMQLLGEIKHENLVEIISFYHSEDQKLVIYELVSDGTLFELLHEGRGIGRIPLDWNTRLAIIKDIAKGLDFLHQYLSSHKVPHANLKSSNVLIHQDNQGYHSKLIDYGFLPLLSSSKKNEEKLAISKSPEFFKGKKLTHKTDVYCFGIIMLEIITGKIPGHILGDEVEEVTTNDLSDWVRTVVNNDWSTDILDLEILAEREGHDAMLNLTEIALECTDMIPENRPKMSVVLRKIEEIEQMMKENE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03442 615 SUPERFAMILY L domain-like 33 197 - -
Tsu06g03442 615 SUPERFAMILY Protein kinase-like (PK-like) 331 604 IPR011009 -
Tsu06g03442 615 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Tsu06g03442 615 Gene3D Transferase(Phosphotransferase) domain 1 403 615 - -
Tsu06g03442 615 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 11 609 - -
Tsu06g03442 615 ProSiteProfiles Protein kinase domain profile. 327 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03442 615 Pfam Protein kinase domain 330 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03442 615 Gene3D Ribonuclease Inhibitor 33 218 IPR032675 -
Tsu06g03442 615 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Tsu06g03442 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 609 - -
Tsu06g03442 615 Gene3D Phosphorylase Kinase; domain 1 293 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03442 Tsu-Chr6 45404457 45407784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03442 4 608 Receptor kinase-like Gene Family AT1G48480 34.992 1.68e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu06g03442 Pkinase 6.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03442 - - gmx:102668068 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03442 06 45404457 45407784 Tsu06g03442 06 45404457 45407784 ECH