Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03432 ATGGCTTCAACAACCCCTCAAGTCATAACCTGCAAAGgTGCAGTAGCATGGGGAGCTGGAGAGGCATTGGTAATTGAGGAAGTGGAAGTCAGTCCACCTCAACCATTGGAGATTAGGATTAAGGTTGTCTCCACCTCTCTTTGTCGTAGTGATCTTTCTGCTTGGGAATCTCATGCCATATTTCCTCGCATATTTGGCCATGAAGCATCTGGGGTTGTTGAGAGTGTAGGGCAAGGAGTGACTGAATTCAAAGAAGGGGACCATGTGTTAACAGTTTTCATTGGAGAATGCATGTCATGCAGGCCGTGCAAATCAGGAAAAAGTAATATTTGTCAAGTTTTGGGTTTGGAAAGAAAGGGTTTAATGCATAGTGATCAAAAGACAAGATTTACAGTAAAAGGGAAGCCTGTTTATCATTATTGTGGCGTTTCAAGTTTTAGCGAATATACAGTAGTCCATTCTGGATGTGCCGTGAAAGTCGGTCCTCATGTACCTCTTGAGAAAATATGCCTTCTTAGCTGCGGGGTTGCTGCAGGTCTAGGTGCAGCATGGAATGTTGCTGATGTGACAAAAGGATCAACAGTGGTTATATTTGGTCTTGGAACTGTTGGCCTTTCTGTTGCTCAAGGTGCCAAACTAAGGGGTGCATCTAGAATAATTGGCGTTGACAACAATCCACAGAAGTGTGAAAATGCAAAATCTTTTGGGATTACGGAAGTTGTTGATCCGAATTTGTACAAAGAACCTATCGTGCAGGTTATTAAGCGCATTACTGATGGTGGCGCAGATTTCTGTTTTGAATGCGTAGGTGACACTGATATGATAACCACCGCATTGCAATCATGCTGTGATGGATGGGGTTTGACTGTAACACTTGGTGTACCAAAGGTGAAGCCTGAGATGTCAGCTCATTATGGATTATTCCTGACAGGAAGAACATTAAAAGGATCTCTATTTGGTGGATGGAAACCTAAAACTGATCTTCCTTCATTAGTAGAGAAGTATGTGAACAAGgAAATCCAGATTGATGACTACATAACACACAATTTACCATTTGATGAAATTAACAAAGCTTTCAATCTCATGAAGGAAGGAAAGTGTCTTCGTTGTGTCATCCATATGCCAAGATAA 1131 0.4164 MASTTPQVITCKGAVAWGAGEALVIEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGVVESVGQGVTEFKEGDHVLTVFIGECMSCRPCKSGKSNICQVLGLERKGLMHSDQKTRFTVKGKPVYHYCGVSSFSEYTVVHSGCAVKVGPHVPLEKICLLSCGVAAGLGAAWNVADVTKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCENAKSFGITEVVDPNLYKEPIVQVIKRITDGGADFCFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLFLTGRTLKGSLFGGWKPKTDLPSLVEKYVNKEIQIDDYITHNLPFDEINKAFNLMKEGKCLRCVIHMPR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03432 376 Gene3D - 14 369 - -
Tsu06g03432 376 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 5 374 - -
Tsu06g03432 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Tsu06g03432 376 Gene3D - 179 317 - -
Tsu06g03432 376 CDD alcohol_DH_plants 9 373 - -
Tsu06g03432 376 SUPERFAMILY GroES-like 325 373 IPR011032 -
Tsu06g03432 376 Pfam Alcohol dehydrogenase GroES-like domain 37 159 IPR013154 -
Tsu06g03432 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 338 IPR036291 -
Tsu06g03432 376 PANTHER ALCOHOL DEHYDROGENASE 5 374 - -
Tsu06g03432 376 SUPERFAMILY GroES-like 4 184 IPR011032 -
Tsu06g03432 376 Pfam Zinc-binding dehydrogenase 203 324 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03432 Tsu-Chr6 45318064 45322888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03432 37 111 Monolignol Biosynthesis Gene Families AT2G21730 39.241 2.41e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03432 K00001 - gmx:100819938 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03432 06 45318064 45322888 Tsu06g03432 06 45318064 45322888 ECH