Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g03401 | ATGGCAAATAGACTTCAGTTTGAGAATAATTGTGATATTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTATGGTTGCCATTGGAGGTTCTGAAGGCTTCTACAGTGAATTTGAATCTGAGTTATCTGGTGTTATCCCTGTGGTGAAGACATCTATTGCCGGCACTCGTCTTGTTGGCCGTCTTTGTGCTGGAAACAAGAATGGGCTTCTCTTGCCCCATACTACCACAGACCAAGAACTTCAACATTTGAGAAACTGTCTACCTGATCAAGTTGTTGTTCAGAGGATAGAAGAAAAATTATCTGCTTTGGGAAATTGCATAGCATGTAATGACCACGTGGCCCTCACTCACACCGATCTTGACAGGGAAACCGAGGAGATAATTGCAGATGTTCTAGGAGTAGAAGTTTTCAGGCAGACCATTGCCGGTAATATTCTTGTTGGGAGTTTCTGTGCCCTCTCAAATAGAGGTGGTTTGGTCCATCCTCATACTTCCATAGAAGATTTGGATGAACTTTCTACGCTTCTTCAAGTTCCTTTGGTTGCTGGAACTGTGAACCGAGGTAGTGAAGTGATAGCTGCTGGAATGATAGTTAATGATTGGACAGCATTTTGTGGTTTAGACACCACAGCAACAGAGTTCTCTGTAATTGAAAGTGTTTTCAAGCTGAGAGATTCACAACCTAGTGTCATAGTTGATGAGATGAGAAAATCACTCATTGATAGCTATGTCTGA | 738 | 0.4187 | MANRLQFENNCDIGVFSKLTNAYCMVAIGGSEGFYSEFESELSGVIPVVKTSIAGTRLVGRLCAGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIEEKLSALGNCIACNDHVALTHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSFCALSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMIVNDWTAFCGLDTTATEFSVIESVFKLRDSQPSVIVDEMRKSLIDSYV | 245 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g03401 | 245 | Hamap | Translation initiation factor 6 [eif6]. | 1 | 245 | IPR002769 | GO:0042256|GO:0043022 | |
Tsu06g03401 | 245 | TIGRFAM | eIF-6: putative translation initiation factor eIF-6 | 4 | 224 | IPR002769 | GO:0042256|GO:0043022 | |
Tsu06g03401 | 245 | Pfam | eIF-6 family | 4 | 203 | IPR002769 | GO:0042256|GO:0043022 | |
Tsu06g03401 | 245 | SUPERFAMILY | Pentein | 1 | 224 | - | - | |
Tsu06g03401 | 245 | CDD | IF6 | 4 | 223 | IPR002769 | GO:0042256|GO:0043022 | |
Tsu06g03401 | 245 | Gene3D | - | 1 | 225 | - | - | |
Tsu06g03401 | 245 | SMART | eIF6neu2 | 3 | 204 | IPR002769 | GO:0042256|GO:0043022 | |
Tsu06g03401 | 245 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 245 | IPR002769 | GO:0042256|GO:0043022 | |
Tsu06g03401 | 245 | PIRSF | Transl_init_IF-6 | 1 | 226 | IPR002769 | GO:0042256|GO:0043022 | |
Tsu06g03401 | 245 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 245 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g03401 | Tsu-Chr6 | 44971975 | 44974867 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g03401 | 1 | 245 | Eukaryotic Initiation Factors Gene Family | AT3G55620 | 86.122 | 1.11e-163 | 451 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g03401 | K03264 | - | gmx:100800352 | 440.269 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu06g03401 | 06 | 44971975 | 44974867 | Tsu01g03183 | 01 | 39232833 | 39240700 | PCT |