Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03393 ATGTCATCACCAAACAAACCCAAACCCCTCCTTCCTTTGAAAGCCCGCCTTTCGATTTCATTACTTATGACTTTAACGGACGCTTCTTGTCGATCTAATGGCACCGTTAACCGCCGTCTTCTCAACATTCTAGAACGTAAATCGTTAGCTAAAGCCACTCCAATTAATGGCGTTTCGACAAAAGATATAACTGTTAACGCCGAATGTAACATTTGGTTCCGTCTCTTCACTCCCACCGACAATGTTACCGGAGCTGAAGGTGATAACAAAACCGCCTCCCTTCCCGTCGTAATTTTTTTCCATGGTGGAGGCTTCACGTTTCTTTCCGCCGCTTCAACATCCTACGACACCCTTTGTCGTCGATTCTGCCGAGAAATCAATGTCATTGTTGTCTCTGTCAATTACCGCCGCACACCAGAGTATCGCTACCCGACACAATACGAAGACGGAGAATCCGTACTGAGATTCCTCGACGAGAACAAATCCATTTTACCGAAAAATGTTGACTTGTCAAAATGTTTCCTCGCAGGGGACAGCGCGGGTGGAAATCTAGCACATCACATTGCGGTTCGGGCTTGCAAAGCGGGGTTCCAGAAAATCCGTGTAATCGGGTTGATTTCAATCCAACCGTTTTTTGGCGGGGAGGAGCGAACAGAGGCGGAGATTCACCTTGAAGGGTCATTTATGATTTCGATGGCAAGGACGGATTGGCTGTGGAAGGTGTTTTTGCCAGAGGGATCGAATCGGGATCATGGAGCGGCTAATGTAAGCGGGCCGAATGCAGAGGATTTGTCGGGTTTGGATTTTCCGGATACACTTGTTTTTGTGGGCGGGTTTGACGCGTTAATTGATTGGCAAAAGAGGTATTATGATTGGTTGAAGATATCTGGAAAAAAGGCCGAGTTGATTGAATACCCAAACATGATGCATGGTTTTTATGCATTTCCTGATTTGCCTGAGTcttctcaatttatttttcaagtCAAGGATTTTATCAACAATAGAGTCTCCAATTctaaatga 1023 0.4457 MSSPNKPKPLLPLKARLSISLLMTLTDASCRSNGTVNRRLLNILERKSLAKATPINGVSTKDITVNAECNIWFRLFTPTDNVTGAEGDNKTASLPVVIFFHGGGFTFLSAASTSYDTLCRRFCREINVIVVSVNYRRTPEYRYPTQYEDGESVLRFLDENKSILPKNVDLSKCFLAGDSAGGNLAHHIAVRACKAGFQKIRVIGLISIQPFFGGEERTEAEIHLEGSFMISMARTDWLWKVFLPEGSNRDHGAANVSGPNAEDLSGLDFPDTLVFVGGFDALIDWQKRYYDWLKISGKKAELIEYPNMMHGFYAFPDLPESSQFIFQVKDFINNRVSNSK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03393 340 Pfam alpha/beta hydrolase fold 97 313 IPR013094 GO:0016787
Tsu06g03393 340 Gene3D alpha/beta hydrolase 2 340 IPR029058 -
Tsu06g03393 340 PANTHER CARBOXYLESTERASE 18-RELATED 4 335 - -
Tsu06g03393 340 PANTHER ARYLACETAMIDE DEACETYLASE 4 335 - -
Tsu06g03393 340 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 97 113 IPR002168 GO:0016787
Tsu06g03393 340 SUPERFAMILY alpha/beta-Hydrolases 42 334 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03393 Tsu-Chr6 44862607 44863629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03393 8 333 Carbohydrate Esterase AT3G05120 37.538 7.58e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03393 - - gmx:102665243 466.077