Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03362 ATGAAGATAGATGATATTTGGAGCATGATTTGTGGGGACTATTGTTTCTCTGAGTATGGAGGAAAGtcattttcatgtatttttcatcatcaattagtaatttgttttgatgTGTTACTAGTACTAATCATGTTATCATTCATCATGATCTTGATGACTTCCTCAAGACCCTTTTGGAATCAAGTAAGATATTCAAAATTGCAGTTAGTTTCTTCCATAATTAATGGCTTTCTTGGTTTGTTGCATTTATCATTAGGAATTTTGGTTTTAGAGGATATGttcaaaaaaatccaccaaGTATTTCCTCTTAACCGGTGGTTGCTAGAACTCTTTCATGGATTCACATTGTTGTCAGTAAGTTTAATTCTAAGCTTTCGGCTAAAACAACTCTCAAGAGCATGGTTGTGGACGTTTTCTGTTCTCGTATTCATTGCTTCTTGTATATTATGTGCTTTATCCATGTTTAATGAAAATAGCAGCCGCGAACTATTCCCGAAGGCAGCTTTAGATATTCTATCTTTTCTTGGAGCAAATTTGTTGCTATTATGTACATACAAAACATGTACATGTGAAGGTGTTGACAGAGAGATCATTGAAAGCCTGCATGCTCCTTTAAATGGTCAGTTCAATGAAGTTGATGATCCTATTAGCAATGTTACACCGTTTTCCGAAGCGGGATTCTTTAGTAAGATTTCATTTTGGTGGTTGAACCCGTGGATGAAAATGGGTCAGGAGAAAACACTTCAAGATGAGGATATCCCAAAGTTAAGAGAGATCGACCGAGCAGAAACTTGTTATTTGTCTTTTTTAGAACAGTTAAACAAGAAAAACCAAAATGAACCATCGTTACATTCGTCAATATTATGGACCATAATTCAGTGTCACAAGAGAGAGATTTTGATAACAGGATTCTTGGCTTTTCTCAAGGTAATCACTTTATCTTCTGGTCCTCTACTTCTGAATGAATTTATATTGGTTGCTGAAGGTAATAAAAGTTTTGAATATGAAGGTTATGTATTGGTTATTTCAATCTTCTTTATAAAGATCCTAGAATCCTTATCACAAAGACAATGGTATGTTCGAAGTAGACTCGTTGGAATGAAGGTAAGATCACTACTTACTGTGGccatttacaaaaaaattctaAGGCTATCAAATTCTGCAAGATTGACTCACTCTGGTGGTGAGATAATGAATTATATGATCGTGGATGCATATAGAATCGGAGAATTTTCATTTTGGTTTCACCAGACTTGGACAACAAGCCTCCAATTGTGTATCGTATTAATAATTCTTTTTCGTACAGTTGGACTAGCCACACTAGCACCATTGTTGGTGATAGTTCTCACTGTGTTTTGCAATGCTCCTGTAGCAAAGTTACAACACAAGTTTCAAAGCCAACTTATGGTGGCACAAGATAAAAGATTAAAGGCTTGTTCAGAGGCTCTTGTGAATATGAAAGTGTTGAAGCTATATGCATGggaaacacattttaaaaatgttgtaGATAACTTACGAAACGTGGAACTCAAATTGTTATCTGCAGTGCAACTAAGAAGAACATaccatatatttttcttttcgaCATCACTGATGTTGGCGTCAACTGCTTTTTTCTTGGCATGTTATTTCTTAGATGTTCCTTTGAATGCAAGTAATGTTTTCACTTTTGTGGCAACTTTGCGCCTTATTCAAGAACCAATTTCAAGCATCCCTGATGTTATTGCAGCGATCATTCAGGCAAAAGTTGCCTTTTCTCGGATTGTTACTTTCCTTCAGGCACCCGAATTGCAGAGTGGAAATTTCAAGAAAAGTTGTTTTAACAACAACCTCAAAAACtcaatttcaataaaatgtGCCGACTTTTCATGGGAAGATAATCCATCAAGGCCAACATTAAGGAACATAAATTTAGATGTTAAACAAGGACAAAAGGTTGCTATTTGTGGAGAAGTTGGCTCAGGAAAATCAACCATCTTAGCATCAATTCTTGGAGAAGTTACTAAAACAAAGGGAACTATTGATGTTCATGGGAAGTTTGGATATGTTTCTCAAACAACATGGATACAAACAGGCACAGTAAGGCAAAACATTTTGTTTGGATCAGAGTTTGATGATCAAAGATATCAAGAAACACTTCAGAGGTCTTCATTGACAAAGGACCTAGAATTGTTTCCCTATGGGGACCTAACTGAAATAGGTGAAAGAGGAGTTAATTTAAGTGGAGGACAAAAGCAAAGAATTCAACTTGCTCGCGCATTTTATCAGAATGCTGATATATATCTATTGGATGATCCATTTAGTGCTGTTGATGCTAATActgcaaaaaatttgtttaatGAATACATCATGGAAGGACTCAAAGGAAAAACTGTCTTACTTGTGACTCATCAAGTCGACTTCCTCCCAGCATTTGATTCTGTTTTGTTGATATCTGATGGGGTAATCCAACAAGCTGGTCGATATCACCAACTATTAAGCTCGAGCCAAGAATTCCATGACCTTGTCAATGCTCACAAGGTAACTGTTGGTTCTAACAAACTCGCTACAAGCGTTATTTCCACGAGACATTCAACTTCCAGAAAGAGAACTACGCCGGATCCTATGTTGAAGGAGTTTAAAACACCAAATGgaaatcaattaattcatcaagAAGAGATGGAGAAAGGAGACACAAGATTGAAAGCTTACAAACAATATCTGAATCAGATGAAAGgatatatattattctttatGGCTTCTCtatttttccttatttataCTGTTTGTCAGATATTGCAAAATTCATGGATGGCTTCTAATGTTGACAATCCTCATGTCAGCACATTGCAATTGGTTTtagtttatttctttattggtgTTTTATCAATAGTTTTCATGTTCATAAGATGTCAACTTGTAGTTACTTTGGTTTTGGGGGTTGTCACATGGCAAGTTTTGATTGTAGCTATACCAATGGTTTATGTTGCAATTCGCTTGCAGAGATACTATTTTGCCTCAGCAAAAGAAGTAATGAGGTTGAATGGCACAACAAAATCCTCATTAGCTAATCATGTAGCCGAAACTATAGCCGGAGCTGTAACCATAAGGGCTTTTGAGGAGGAAGATCATTCTTTTAAGAAGAACTTTGATCTGATTGATATCAATGCTAGTGCTTTTTTTCATAGTTTTGCCTCAAACGAGTGGTTGATACAACGATTAGAAACAATTAGTGCAGTTGTTCTCGGCGCTGCAACACTTTGCCTTGTAATGCTCCCCCCCGGAACTTTCCCCTCAGGAATAATTGGCATGGCTCTATCTTATGGCCTATCACTAAGCTCTTCCTTAgtattttcaattcaaaatcaTTGCACTCTTGCTAATTATATCATATCAGTAGAGAGGGTAAATCAATATATGCATATTCAAAGTGAGGCAGAAGAAATAGTAGAAGATAATCGTCCTCCTTTGAATTGGCCAGTTGCAGGTGAAGTAGTAATAGAAGACTTGAAGATACGATATCGAGATGGAGGACCACTAGTACTTCATGGGATAACATGCACATTTAAAGCCGGTCACAAGATTGGTATTGTTGGAAGAACAGGTAGTGGGAAGTCTACTCTTATTAGTGCTTTATTTCGTCTTGTGGAACCAGCAGGAGGAAGAGTGGTAGTTGATGGTATAGACATTTCATCTATTGGCCTTCATGATTTAAGGTCACATATTGGGATTATACCTCAAGATCCTACCCTTTTCAATGGGACAATAAGATTTAACTTGGATCCTTTATCTCAACACACTGATCAAGAGATGTGGGAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTTGTCCAAGGGAAACAAGAAGGTTTAGACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAATTATTCTGTTTGGGGCGTGCTATTTTgaggaaaagtaaaatattGGTATTGGATGAAGCAACTGCTTCAATTGATAATTCTACTGATTTGATTGTTCAGAAAATCATAAGGGCTGAGTTTTTAGATTGTACTGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCAATATGGTTCTTGCTATAAGTGATGGAAAATTGGCGGAGTATGACGAGCCAGTGAATTTGATGAAGAGAGAAGAATCATTGTTCAAGAAGCTTGTCGAGGAATACTAG 4185 0.3527 MKIDDIWSMICGDYCFSEYGGKSFSCIFHHQLVICFDVLLVLIMLSFIMILMTSSRPFWNQVRYSKLQLVSSIINGFLGLLHLSLGILVLEDMFKKIHQVFPLNRWLLELFHGFTLLSVSLILSFRLKQLSRAWLWTFSVLVFIASCILCALSMFNENSSRELFPKAALDILSFLGANLLLLCTYKTCTCEGVDREIIESLHAPLNGQFNEVDDPISNVTPFSEAGFFSKISFWWLNPWMKMGQEKTLQDEDIPKLREIDRAETCYLSFLEQLNKKNQNEPSLHSSILWTIIQCHKREILITGFLAFLKVITLSSGPLLLNEFILVAEGNKSFEYEGYVLVISIFFIKILESLSQRQWYVRSRLVGMKVRSLLTVAIYKKILRLSNSARLTHSGGEIMNYMIVDAYRIGEFSFWFHQTWTTSLQLCIVLIILFRTVGLATLAPLLVIVLTVFCNAPVAKLQHKFQSQLMVAQDKRLKACSEALVNMKVLKLYAWETHFKNVVDNLRNVELKLLSAVQLRRTYHIFFFSTSLMLASTAFFLACYFLDVPLNASNVFTFVATLRLIQEPISSIPDVIAAIIQAKVAFSRIVTFLQAPELQSGNFKKSCFNNNLKNSISIKCADFSWEDNPSRPTLRNINLDVKQGQKVAICGEVGSGKSTILASILGEVTKTKGTIDVHGKFGYVSQTTWIQTGTVRQNILFGSEFDDQRYQETLQRSSLTKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARAFYQNADIYLLDDPFSAVDANTAKNLFNEYIMEGLKGKTVLLVTHQVDFLPAFDSVLLISDGVIQQAGRYHQLLSSSQEFHDLVNAHKVTVGSNKLATSVISTRHSTSRKRTTPDPMLKEFKTPNGNQLIHQEEMEKGDTRLKAYKQYLNQMKGYILFFMASLFFLIYTVCQILQNSWMASNVDNPHVSTLQLVLVYFFIGVLSIVFMFIRCQLVVTLVLGVVTWQVLIVAIPMVYVAIRLQRYYFASAKEVMRLNGTTKSSLANHVAETIAGAVTIRAFEEEDHSFKKNFDLIDINASAFFHSFASNEWLIQRLETISAVVLGAATLCLVMLPPGTFPSGIIGMALSYGLSLSSSLVFSIQNHCTLANYIISVERVNQYMHIQSEAEEIVEDNRPPLNWPVAGEVVIEDLKIRYRDGGPLVLHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGRVVVDGIDISSIGLHDLRSHIGIIPQDPTLFNGTIRFNLDPLSQHTDQEMWEVLGKCQLREVVQGKQEGLDSSVVEDGSNWSMGQRQLFCLGRAILRKSKILVLDEATASIDNSTDLIVQKIIRAEFLDCTVITVAHRIPTVMDCNMVLAISDGKLAEYDEPVNLMKREESLFKKLVEEY 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03362 1394 Gene3D ABC transporter type 1, transmembrane domain 964 1140 IPR036640 GO:0005524|GO:0016021
Tsu06g03362 1394 CDD ABC_6TM_ABCC_D1 301 588 IPR044746 GO:0140359
Tsu06g03362 1394 Pfam ABC transporter 1175 1323 IPR003439 GO:0005524
Tsu06g03362 1394 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 300 580 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g03362 1394 SUPERFAMILY ABC transporter transmembrane region 907 1140 IPR036640 GO:0005524|GO:0016021
Tsu06g03362 1394 Pfam ABC transporter 633 767 IPR003439 GO:0005524
Tsu06g03362 1394 Gene3D - 1141 1393 IPR027417 -
Tsu06g03362 1394 Gene3D - 592 860 IPR027417 -
Tsu06g03362 1394 SUPERFAMILY ABC transporter transmembrane region 288 588 IPR036640 GO:0005524|GO:0016021
Tsu06g03362 1394 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 617 838 IPR003439 GO:0005524
Tsu06g03362 1394 ProSitePatterns ABC transporters family signature. 740 754 IPR017871 GO:0005524
Tsu06g03362 1394 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1158 1392 IPR003439 GO:0005524
Tsu06g03362 1394 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 970 1394 - -
Tsu06g03362 1394 Pfam ABC transporter transmembrane region 300 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g03362 1394 Pfam ABC transporter transmembrane region 954 1082 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g03362 1394 SMART AAA_5 1184 1376 IPR003593 -
Tsu06g03362 1394 SMART AAA_5 642 815 IPR003593 -
Tsu06g03362 1394 CDD ABCC_MRP_domain2 1156 1376 - -
Tsu06g03362 1394 Gene3D ABC transporter type 1, transmembrane domain 287 591 IPR036640 GO:0005524|GO:0016021
Tsu06g03362 1394 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 64 970 - -
Tsu06g03362 1394 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 970 1394 - -
Tsu06g03362 1394 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 64 970 - -
Tsu06g03362 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1147 1389 IPR027417 -
Tsu06g03362 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 838 IPR027417 -
Tsu06g03362 1394 CDD ABCC_MRP_domain1 615 814 - -
Tsu06g03362 1394 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 966 1109 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03362 Tsu-Chr6 44576931 44590155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03362 436 877 Calmodulin-binding Proteins AT2G36910 24.731 1.41e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03362 K05666 - csin:114272338 1494.18