Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03348 ATGCTTATGTTGGCTGGGTCAGACACAATTTTCACAACAATAACATGGACCCTAGCCTTATTGTTGAATAATAAGAATGCTTTAAAGCGTGCACAAGAGGAAATTGATCATCACATAGGTAGAGACAGAAGGGTAGAATCATCAGACATAAAAAATCTAGTTTATTTACAAGCAATTGTAAAAGAAACTTTGAGGCTATACCCCCCAGGTCCACTATTAGTACCCCATGAAGCTATAAAAGATTGTTACATTCAAGGCTATAATGTTCCAAAAGGTACACGTGTGTTTGCAAATGTGTGGAAATTACATAGAGATCCAAGTATTTGGTTCAAGCCTGAAATTTTTTCACCTGAAAGGTTTATTAATGAAAATGGAGAAATTGATCATGAAAGTCATCAATTTGATTACCTTCCTTTTGGTTTAGGGAGAAGAGCTTGTCCTGGAGCTATGTTTGCTACACAAGTGATTTTCATTACACTTGCTCGTTTTCTTCATGGGTTTGATTTAGAATTGGCAATGGATGAAGTTGTTGATATGAAAGAAGGTTTGGGTATAACCTTGCCTAAGTTAACTCCATTGCAACTTCTTTTGACACCGAGATTATCATAA 609 0.358 MLMLAGSDTIFTTITWTLALLLNNKNALKRAQEEIDHHIGRDRRVESSDIKNLVYLQAIVKETLRLYPPGPLLVPHEAIKDCYIQGYNVPKGTRVFANVWKLHRDPSIWFKPEIFSPERFINENGEIDHESHQFDYLPFGLGRRACPGAMFATQVIFITLARFLHGFDLELAMDEVVDMKEGLGITLPKLTPLQLLLTPRLS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03348 202 Pfam Cytochrome P450 2 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Tsu06g03348 202 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 Gene3D Cytochrome P450 1 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS E-class P450 group I signature 146 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS E-class P450 group I signature 98 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PRINTS E-class P450 group I signature 136 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PANTHER CYTOCHROME P450 82C3-RELATED 2 202 - -
Tsu06g03348 202 SUPERFAMILY Cytochrome P450 2 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03348 202 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03348 Tsu-Chr6 44494395 44495003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03348 2 201 Cytochrome P450 AT4G31940 58.706 6.04e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03348 - K17961 gmx:100790675 281.952