Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03346 ATGGATAATAATTTCCTTTCATACCCAACAACTATAGCACTAGCTATATCATTAATTCTTCTATACAACATATGGAGGATCCAAAAACCTAGTAACAAATTAAAGGGTATGAAACCACCACAACCTTCATATGCATTACCTTTAATAGGTCACCTCCATCTACTAGGAAACCAAATACCCCTTGCAAGAATCTTTGCTTCTTTTTCAGACAAATATGGTCCTATCTTTCAAATCCATTTAGGATCATATCCTGCCCTAGTTATTTCCAACCAAGAAGCAATCAAAGAATGTTTCACCACAAATGACAAAATCTTATGCTCAAGACCAAAGTCAAGTCATGGAATCTATCTTGGTTATAACTATGCTTCTTTTGGAGCTGCACCTTATGGTCCATATTGGATTAAGCTAAGAAAATTAACCATGCTTGAGTTACTTTCATCTCGACGCGTGGAATCGTTGAAACATGTTTATGAATCGGAGATCGATACTTTGATTAACGATCTAATGTTGTATATTAATGGAAAAAACAAGGTTAAGGTTGTGATTAGTGAATGGATggaaaaattaacatttaataTAATCACAAAGATGATTGGTGGGAAAAGATATTTTGAGTATTTGCAAGATATGGATAATGATGAAAATGGTCATATTGTGAAACTTATAAAAGAATATATGCATATATCTGGTGAATTTGTTCCTTCAGATTTGATTCCAATTCTTGGTTGGTTTGGTTTTGAAGGACAAGTACTTAAATCCATGAAAAGAGTTGCTAGAGATTTGGATAAACTTGTTGGAAGCTGGATTGAAGAGCATGAAGTTGTTGGTGTGAATAAGTCAAATGATAAACATGATTTCATTGATGTGATGCTTTCTGTGATTGAAGATGATGCTGCTTCTGGTCATAATCGTGATACTATCATCAAGGCAAATATTACGATGCTTATGTTGGCTGGGTCAGACACAATTTTCACAACAATGACATGGACCTTAGCCTTATTGTTGAATAACAAGAATGCTTTAAAGCGTGCACAAGAGGAAATTGATCATCACATAGGTAGAGACAGAAGGGTAGAATCATCAGAcataaaaaatctaatttatttgCAAGCAATTATAAAAGAAACTTTGAGGCTATACCCCCCAGGTCCACTATTAGCACCCCATGAATCTATAGAAGATTGTTACATTCAAGGCTATAATGTTCCAAAAGGTACACGTGTGTTTGCAAATGTGTGGAAATTACATAGAGATCCAAGTATTTGGTTAGAGCCTGAAAAATTTTCACCTGAAAGATTTATTAATGAAAATGGAGAAATTGATCATGAAAGTCATCAATTTGATTACCTTCCTTTTGGTTTAGGGAGAAGAGCTTGTCCTGGAGCTATGTTTGCTACACAAGTGATTTTCATTACACTTGCTCGTTTTCTTCATGGGTTTGATTTAGAATTGGCAATGGATGAAGTTGTTGATATGAAAGAAGGTTTGGGTATAACCTTGCCTAAGTTAACTCCATTGCAACTTCTTTTGACACCAAGATTATCATAA 1548 0.3404 MDNNFLSYPTTIALAISLILLYNIWRIQKPSNKLKGMKPPQPSYALPLIGHLHLLGNQIPLARIFASFSDKYGPIFQIHLGSYPALVISNQEAIKECFTTNDKILCSRPKSSHGIYLGYNYASFGAAPYGPYWIKLRKLTMLELLSSRRVESLKHVYESEIDTLINDLMLYINGKNKVKVVISEWMEKLTFNIITKMIGGKRYFEYLQDMDNDENGHIVKLIKEYMHISGEFVPSDLIPILGWFGFEGQVLKSMKRVARDLDKLVGSWIEEHEVVGVNKSNDKHDFIDVMLSVIEDDAASGHNRDTIIKANITMLMLAGSDTIFTTMTWTLALLLNNKNALKRAQEEIDHHIGRDRRVESSDIKNLIYLQAIIKETLRLYPPGPLLAPHESIEDCYIQGYNVPKGTRVFANVWKLHRDPSIWLEPEKFSPERFINENGEIDHESHQFDYLPFGLGRRACPGAMFATQVIFITLARFLHGFDLELAMDEVVDMKEGLGITLPKLTPLQLLLTPRLS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03346 515 PANTHER CYTOCHROME P450 82C3-RELATED 15 515 - -
Tsu06g03346 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Tsu06g03346 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 515 - -
Tsu06g03346 515 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 SUPERFAMILY Cytochrome P450 39 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 Pfam Cytochrome P450 40 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03346 515 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03346 Tsu-Chr6 44456725 44460813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03346 40 514 Cytochrome P450 AT4G31940 48.361 3.10e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03346 - - gmx:100790675 732.25