Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03339 ATGGAGTGCAATAAGGATGAGGCTACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTCATTGCAAAGGACATATCGGGAGCAAAAAAGTTTGCTTTGAAAGCTCAAAATCTATTTCCTTCCCTTGAGGGTATTCCTCAAATGATAGCAACACTTGACGTGTATATTTCCGCTGAGAATAAAGTGAAAGGAGAAGAAGATTGGTATGGTATACTTGGTGTGAACCCGCGTGCCGACGATGATACGGTTAGGAAACATTATAGGAAGCTAGCTCTCATGCTTCACCCAGACAAGAACAAGTCTGTCGGAGCCGATGGggcttttaaatttatttcagaGGCGTGGAGTATACTGTCCGATAAGGCTAGACGGGCAGCTTATGATGAAAAGATAAATGCAAAAGCACAGAAAGGTTCAACCATTTTTGGCGGTTCATCAGCAAAAGCGGCGGCAAATGGGGCTAACCATAGTAAAAAGAAACCCCCTTCAAGTTCAAGGACACAGAAAAATATGGCTAAAGAACAAACTTCTTCTGCTGCCAATAAATCAAAATCTACATTTTGGACTACTTGCCATCGCTGTAAGATGCAATACGAGTATCTCAGAATGTATCTTAATCTGAAACTCGTGTGTCCTAGCTGCCATGAAGCCTTTTTGGCTTTAGAAACTAATCCGCCTCCTGCAAGTGGTATCAGACCTGGGGCTACGTTGAATTTTAAGCAAAAGCCCGATCACCAAGGACCTCATAAAAGCAAATCTAATGCTGGAAAGAACAACATGGCAACTCCAAATGTTGGATCAGGGTCTAACAAGAATAGTTTCCAGTGGGCTCCATTCTCGAATTCTGGCGTTTCTAATGTGGCTCAAGCTGCAAATGTGGTTCAGCAGGCATATCATAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCTGCTACCAAAAAGGAAGAGGCTTTAAGAAGGAAGCAGAATGTTTCCAAAAAAGGTTACTTTAATCCAGCTAAGAGGAAAAGGGGGGCCATGGAGGGAAATGGAGCATCTAACTTAGGCAGTGGTATCAAGAAGTTCAACTCTACTAGAAATCTCTCCCCAGTTGAACTTCAGAATCTTCTTGTTAAGAAAGCTAGAAAAGAAATTAGCAATAAACTCAAAGAATTTCAGTCAAATACTGTTGATACATCAGCGGCGAAAAAGAGTGGAGATTGCTTCCAGAAAGAAGACCAGAAAGGAGATATTTCAGCAAGAAACTCTGAGATCTGTACTGAAAATAGCATTGGGAAGTCAGAAGGTGTGAAGAATAGTTTGCAGGCTAGCACGTCATTTGCAGCTCCTACCATTGATAGCAATTGCACGGAAATTTTGGATTCAATGCTAGTAGATGTTCCAGATCCtgattttcatgattttttcaaGGATCGAACTGAAAGGTCTTTTGGTGAAAATCAAGTATGGACTGCATATGATGGTGATGATGGGATGCCTCGACGTTATGCTATGATTCACAAAGTGATCTCTCTGAATCCATTCAAGTTGCAGATCAGTTGGCTCTACCCAAATACCAACAGCAGCGAACCAGGCCACCAAAATTGGATTGCGTTAGGCTTTTCAAAAACTTGTGGGGAGTTCAGAATAGGTAAACGCGAAATCTATGACTCGAtcaattatttttctcaaaaggttAGGTGGATAAAAGGTAATGATGGAGCCATTTGTATATATCCCAAAAAAGGAGAGGTTTGGGCCATCTATAGGAATTGGTCTCCTAACTGGAATGAGCTAATAGCAGATGATGTGAGACACAAATATGATATGGTTGAAGTACTTGAGGATTTTGTTGAAGAACACGGCGTAACTGTCATTCCTTTGGTCAAGGTGGCAGGGTTCAAGACAGTATTTCACCACCACTTTGATGACAATGAGATCAAAATCATTCCGAGGAAGGAGATGCTTCGATTCTCTCATCCGGTACCTTCGTACGTACTTACTGGCGAAGAAGCTGCTAATGCTCCAAAAGGTTGCAGGGTGCTGGACCCAGATGCTACTCCATTTGAACTTCTCGAGGTGATAAAATTCACGCAAGAGGAAAACATAGTTGACACCGTGGATAGTATCACCAAAGAAGCTAATTGTGAGGAAGTGGTCACTGATATGGGACAACTTGATGGAGCAAAGGAGGCATTGGAGAAAGTTATTCATAAAATGGAAATTTCAGAAGAGGACAGAGGGAAGAAGATATGCATAGGTTTGTAG 2244 0.4118 MECNKDEATRAKEIAERKFIAKDISGAKKFALKAQNLFPSLEGIPQMIATLDVYISAENKVKGEEDWYGILGVNPRADDDTVRKHYRKLALMLHPDKNKSVGADGAFKFISEAWSILSDKARRAAYDEKINAKAQKGSTIFGGSSAKAAANGANHSKKKPPSSSRTQKNMAKEQTSSAANKSKSTFWTTCHRCKMQYEYLRMYLNLKLVCPSCHEAFLALETNPPPASGIRPGATLNFKQKPDHQGPHKSKSNAGKNNMATPNVGSGSNKNSFQWAPFSNSGVSNVAQAANVVQQAYHKVKRDREEAQAATKKEEALRRKQNVSKKGYFNPAKRKRGAMEGNGASNLGSGIKKFNSTRNLSPVELQNLLVKKARKEISNKLKEFQSNTVDTSAAKKSGDCFQKEDQKGDISARNSEICTENSIGKSEGVKNSLQASTSFAAPTIDSNCTEILDSMLVDVPDPDFHDFFKDRTERSFGENQVWTAYDGDDGMPRRYAMIHKVISLNPFKLQISWLYPNTNSSEPGHQNWIALGFSKTCGEFRIGKREIYDSINYFSQKVRWIKGNDGAICIYPKKGEVWAIYRNWSPNWNELIADDVRHKYDMVEVLEDFVEEHGVTVIPLVKVAGFKTVFHHHFDDNEIKIIPRKEMLRFSHPVPSYVLTGEEAANAPKGCRVLDPDATPFELLEVIKFTQEENIVDTVDSITKEANCEEVVTDMGQLDGAKEALEKVIHKMEISEEDRGKKICIGL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03339 747 MobiDBLite consensus disorder prediction 223 272 - -
Tsu06g03339 747 PANTHER BNAC03G44070D PROTEIN 1 685 - -
Tsu06g03339 747 MobiDBLite consensus disorder prediction 144 178 - -
Tsu06g03339 747 MobiDBLite consensus disorder prediction 251 272 - -
Tsu06g03339 747 CDD DnaJ 66 119 IPR001623 -
Tsu06g03339 747 Pfam Domain of unknown function (DUF3444) 456 663 IPR024593 -
Tsu06g03339 747 PANTHER BNAA04G14940D PROTEIN 1 685 - -
Tsu06g03339 747 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Tsu06g03339 747 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Tsu06g03339 747 PRINTS DnaJ domain signature 68 86 IPR001623 -
Tsu06g03339 747 PRINTS DnaJ domain signature 102 122 IPR001623 -
Tsu06g03339 747 PRINTS DnaJ domain signature 86 101 IPR001623 -
Tsu06g03339 747 SMART dnaj_3 65 122 IPR001623 -
Tsu06g03339 747 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Tsu06g03339 747 Pfam DnaJ domain 66 127 IPR001623 -
Tsu06g03339 747 Gene3D DnaJ domain 63 186 IPR036869 -
Tsu06g03339 747 Coils Coil 718 738 - -
Tsu06g03339 747 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03339 Tsu-Chr6 44380441 44386249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03339 4 337 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.321 3.19e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03339 - - lja:Lj2g3v0520120.1 972.23