Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03334 ATGGCTTCCATTGCTGCTTCAACTGCAGCTGCTTCACTTGGAATGTCAGAAATGCTTGGAAGTCCAATTAAATTCAATGGTGCAACAAGGtctcttccttcttcttcaactccttCTACCTTCAAAACTGTTGCTCTTTTCTCTAAGAAGAAACCAGCACCACCACCAAAGAAAGCTGTAGTTACTCCGGCTAGCGAGGAACTCGCCAAGTGGTATGGTCCAGACAGAAGGATCTTCTTGCCAGATGGTCTCTTGGACAGGTCTGAGATCCCTGAGTACTTGACTGGAGAAGTCCCTGGAGACTATGGTTATGACCCTTTTGGTCTAAGCAAGAAACCCGAAGACTTCGCCAAATATCAAGGATATGAGTTGATTCATGCTAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATATGGAGCCAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACAGGAGCTCTACTTCTTGATGGTGGTACGTTGAACTACTTCGGAAAGAGCATCCCCATCAATCTTGTTGTTGCTGTCATTGCTGAGGTTGTTCTTTTGGGAGGTGCAGAGTACTACAGAATTACCAATGGACTGGATTTGGAAGACAAGCTTCATCCAGGTGGTCCATTTGATCCATTAGGTCTAGCAAATGATCCAGACCAAGCTGCAATTCTAAAAGTGAAGGAAATCAAGAATGGTAGACTTGCTATGTTTTCCATGCTTGGTTTCTTCATTCAAGCTTATGTCACAGGTGAAGGTCCTGTTGAGAATTTTGCAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTCACTGTTATTGCTGGAAATGTTGAAAGGGCTCCAACTCTGTGA 870 0.4333 MASIAASTAAASLGMSEMLGSPIKFNGATRSLPSSSTPSTFKTVALFSKKKPAPPPKKAVVTPASEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKSIPINLVVAVIAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENFAKHLSDPFGNNLLTVIAGNVERAPTL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03334 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Tsu06g03334 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Tsu06g03334 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
Tsu06g03334 289 SUPERFAMILY Chlorophyll a-b binding protein 71 279 - -
Tsu06g03334 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03334 Tsu-Chr6 44342712 44347025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03334 11 289 Chloroplast and Mitochondria Gene Families AT4G10340 83.571 2.94e-154 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03334 K08916 - gmx:100806585 495.738