Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03332 ATGGGTTGTTCAGTATATGTTTTTCTTATCTTTTCTCTAATGGTTTTTGTTTTAAGCCCAAAAGGTGTTTGTGGAAATGCTGAGCTGAAATCACTTTTGGATTTAAAAGCTAGTTTAGATCCAGAAGGACATTTTTTGTCTTCATGGACAATTAATGGTAACCCTTGTGATGATTCATTTGAAGGTGTAGCTTGTAATGAAAAGGGTCAAGTTGCAAATGTTTCATTACAAGGAAAAGGACTTTCTGGTAAATTATCACCAGCTATTGGTGATTTGAAGCATTTGACTGGTCTTTACTTGCATTACAACTCTTTGTATGGTGATATACCAAGAGAAATTGCTAATCTAACTCAGCTTAGTGATTTGTATTTGAATGTGAATCATTTATCTGGTGAAATCCCATCTGAGATTGGTAAAATGGAGAATCTTCAAGTTTTGCAGCTTTGTTATAACCAGTTAACAGGAAGCATACCTACTCAGCTTGGTGATTTGAAAAAGCTTAGTGTTCTTGCTCTACAATCAAACAAGTTAGCTGGAGCTATTCCTGCTAGTTTAGGTGACTTAGGAATGTTAATGAGACTAGATTTGAGCtcgaataatttttttggttcgATTCCAACTAAACTAGCTGAAGCTCCTTTTCTTCAAGTTCTTGATGTTCACAACAATACTCTTTCTGGAAATGTACCTCCTGCTCTGAAGAGACTAGATGACAAATTTGTGTATGAATACAATTTGGGACTATGTGGAGATGGATTTTCAACCTTGAAAGCTTGCAATGCATCAGATCATGCCAATCCTAACAGGCCTGAACCTTATGGCGCAGGAGTTGGTGGTATTCCAAAGGAAATCCCAGAAACCGCAGATATAAAGTTGCCTTGCAATACAACTCGGTGCCAAAATTCGTCGAAATCGAAAAAAACAGCGTCTATTACTGTTGGCATAGTTCTGGCGACAATTGCATTGTCCGCAATAGGCATTCTAAGCATCACAATGTATCGTCGGCGGAAGCAAAAGCTTGGTAGTGCGTTTGATATCACCGAAAGCCGTCTAAGTACCGATCAAACAAAAGGCATATACAGGAAAAACGGATCTCCTTTGGTTAGCCTTGAGTATGCGAATGGATGGGATCCTTTGGCTGATAGTAGAAATTTCAATGGAGATAGGCAAGATATGTTTCAAAGCTTCAGGTTCAACTTGGAAGAAGTGGAGTCGGCGACTCAGTATTTCTCGGAGTTGAATTTGTTGGGTAAGAGTAACTTCAGTGCAACATATAAAGGAGTTTTAAGAGATGGATCTATTGTTGCTATTAAGAGCATAAGTAAAACTAGTTGCAAATCAGATGAAGCTGAGTTTCTTAAAGGATTGAACATTTTGACATCATTGAGGAATGATAATTTGGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGCGAATGCTTTTTGGTTTATGATTTTGTTTCGAATGGAAATTTGTCACAATATCTTGATGTGAAGGAAGGTGATGGTGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTCAAAGGAATTGCGAAAGGTAAACTCTTTCTATCCTACCCTttattagaatatattttactttctaCTAATTTGAGATTCTGGCAATTCATAAGGCCATGGTTTTTGATATCTCACGATACATGTGCACCATATcttgattttttatataaaaatgaacTCACTCGATTTGAATTTGCAGCGTTTGTCTATTTGGACACGACTCTCATGAATCCCGATTCATTCTAA 1776 0.3654 MGCSVYVFLIFSLMVFVLSPKGVCGNAELKSLLDLKASLDPEGHFLSSWTINGNPCDDSFEGVACNEKGQVANVSLQGKGLSGKLSPAIGDLKHLTGLYLHYNSLYGDIPREIANLTQLSDLYLNVNHLSGEIPSEIGKMENLQVLQLCYNQLTGSIPTQLGDLKKLSVLALQSNKLAGAIPASLGDLGMLMRLDLSSNNFFGSIPTKLAEAPFLQVLDVHNNTLSGNVPPALKRLDDKFVYEYNLGLCGDGFSTLKACNASDHANPNRPEPYGAGVGGIPKEIPETADIKLPCNTTRCQNSSKSKKTASITVGIVLATIALSAIGILSITMYRRRKQKLGSAFDITESRLSTDQTKGIYRKNGSPLVSLEYANGWDPLADSRNFNGDRQDMFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSIVAIKSISKTSCKSDEAEFLKGLNILTSLRNDNLVRLRGFCCSRGRGECFLVYDFVSNGNLSQYLDVKEGDGEVLEWSTRVSIVKGIAKGKLFLSYPLLEYILLSTNLRFWQFIRPWFLISHDTCAPYLDFLYKNELTRFEFAAFVYLDTTLMNPDSF 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03332 591 Gene3D Ribonuclease Inhibitor 177 245 IPR032675 -
Tsu06g03332 591 Gene3D Phosphorylase Kinase; domain 1 381 488 - -
Tsu06g03332 591 Pfam Protein tyrosine and serine/threonine kinase 414 528 IPR001245 GO:0004672|GO:0006468
Tsu06g03332 591 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Tsu06g03332 591 Gene3D Ribonuclease Inhibitor 25 176 IPR032675 -
Tsu06g03332 591 SUPERFAMILY L domain-like 24 235 - -
Tsu06g03332 591 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 527 - -
Tsu06g03332 591 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 527 - -
Tsu06g03332 591 ProSiteProfiles Protein kinase domain profile. 410 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03332 591 SUPERFAMILY Protein kinase-like (PK-like) 388 526 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03332 Tsu-Chr6 44303026 44307403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03332 9 523 Miscellaneous Gene Families AT4G22730 55.598 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Tsu06g03332 PK_Tyr_Ser-Thr 1.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03332 - - gmx:100789253 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03332 06 44303026 44307403 Tsu01g03164 01 39068547 39071703 PCT