Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03303 ATGGAAGAAAGAGAGATTTTTGGTTCTGGGCATGCTGTTAATGTTAATCAGGCCCCACAGAGCTTCAACTTAGCTCaaaattcattgaatttttCTGGGCCCACCGGAGAGTTGCCGGCGAGTGCACCGGCTGCGGGGTCTGGTGGTATGGAGGTGAAGAAGAAAAGGGGTAGGCCTAGAAAGTCTGAATCTGGAAGTAAACCGGCGTTGTCGCCTATGCCGATTTCAGCTTCCATTCCATTGACTGGAGATTTCTCTGGTTGGAAAAGTGGTGGAGGGAAGCCCTTTGAATCAATCAAAAAGCCTTTGAAGTTAAATGATTTTGATGAAGATGATGGAACAGCTTCCACTGGTTCCAATTTCAAAACTCACGTGCTTACAGTAAATTCCGGAGAGGATGTCTCGATGAAAATAATGTCTCTCTCTCAACAAGAATATCATACTATATCCATTCTATCTGCGACCGGAACAATTTCGAATGTCACACTTCGCCAGTCAGATGCTAGTGGCGGTACTTCGACGTATGAGGGAATTTTTGAGATTCTTTCGTTGTCCGGCTCATTTGTGCCAACTGAGAATGGATTGACAAAGAGCAGAGCTGGCAGGATGAGTGTCTCATTGGCGGGTCCAAATGGTCGTGTTTTTGGGGGTGCCCTGGCTGGTTTGCTTGTAGCTTCTGGTTCTGTGCAGGTTGTGGTTGCGAGTTTTCAACCAGAGCAACAGAAACCAAAGAAGCAAAGGACCGATTATACGTCACCAGCTGCCCCTCCTACATCATCTCATATTAATAATCATGTTTCTGCTGAACAATTGAAACCTATCATGTCACCAGCCGGCTTTAACTTTGCTTCTTTCGGCAATGGCCAAGGTTCTGGCAACTCATCGTCATCCGCGGATGATGAGCATGTCTAA 912 0.4572 MEEREIFGSGHAVNVNQAPQSFNLAQNSLNFSGPTGELPASAPAAGSGGMEVKKKRGRPRKSESGSKPALSPMPISASIPLTGDFSGWKSGGGKPFESIKKPLKLNDFDEDDGTASTGSNFKTHVLTVNSGEDVSMKIMSLSQQEYHTISILSATGTISNVTLRQSDASGGTSTYEGIFEILSLSGSFVPTENGLTKSRAGRMSVSLAGPNGRVFGGALAGLLVASGSVQVVVASFQPEQQKPKKQRTDYTSPAAPPTSSHINNHVSAEQLKPIMSPAGFNFASFGNGQGSGNSSSSADDEHV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03303 303 ProSiteProfiles PPC domain profile profile. 118 258 IPR005175 -
Tsu06g03303 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 240 - -
Tsu06g03303 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 272 - -
Tsu06g03303 303 MobiDBLite consensus disorder prediction 26 76 - -
Tsu06g03303 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 272 IPR039605 GO:0003680
Tsu06g03303 303 MobiDBLite consensus disorder prediction 238 270 - -
Tsu06g03303 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 122 237 IPR005175 -
Tsu06g03303 303 Gene3D - 122 252 - -
Tsu06g03303 303 MobiDBLite consensus disorder prediction 282 297 - -
Tsu06g03303 303 MobiDBLite consensus disorder prediction 282 303 - -
Tsu06g03303 303 CDD DUF296 122 236 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03303 Tsu-Chr6 43855017 43859550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03303 39 247 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 54.978 7.85e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03303 - - cam:101510032 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03303 06 43855017 43859550 Tsu06g03303 06 43855017 43859550 ECH
Tsu06g03303 06 43855017 43859550 Tsu01g03159 01 38950410 38955082 PCT