Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03244 ATGCTTCAGCCATTGATGAATCTTCTCTCTCCATGTTGGAAGCCGTTCGGGCAAAGTGACGATTCTTCATCAGGCATTGTTGGAAGAGAAGGAAAAGACGGATTACTTTGGTTTCGTGATATTGGTAAATATGGCTCTGGTGAATTCTCCATGGCTGTTGTTCAAGCTAATCAAATCCTTGAAGATCAAAGTCAGATCGAATCTGGTCCTCTTGGAACTTTCGTCGGTGTTTACGATGGTCATGGTGGACCTGATGCTGCTCGTTACGTTTGCGATCATTTGTTCCGTAATTTTCAAGCCGTATCGAGTGAGTCACGGGGTGTTGTGACGGATGAGACAATTCAATCAGCGTTTCGTTTAACGGAAGAAGGTTTTACTGCCAGGGTTTCTGAATTATGGAATACTCGACCTCAAGTTGCAACTACTGGAACATGTTGTTTGGTTGGAGTGATTTATCAACAGACACTTTTTGTGGCGAATTTAGGAGATTCCCGTGTTGTTTTGGGAAAGAAAGTTGGGAATACTGGTGGGATTGCGGCAATTCAGCTGTCTACGGAACATAATGCGAATCTTGAGGCTGTTAGACACGAGCTTAAGGAGTTACACCCTCATGATCCCCAGATTGTTGTCCTGAAGCATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTCTCTAGATCAATAGGAGACGTATATATGAAACATGCACAGTTTAACCGGGAACCAATTAATCCGAAGTTCAGACTTCCTGAACCAATGCACATGCCTATCTTGTCTGCTAATCCATCTATTCTTTCTCATCCTATCCATCCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAACACCTGAATAATGACCAAGCAGTCGAGATTGTTCACAGAAGTCCACGCGCGGGTAGTGCCAAGAAACTTATCAAGGCTGCCCTGCAGGAAGCAGCTAGAAAACGAGAAATGCGATATTCAGACCTTCGTTCAATTGACAAGAAAGTGCGACGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATAACTAGAGGTACAGTTCAAAACCCGCCACTGTCAATTCGAAGTGCTCTCAATCACTGA 1119 0.429 MLQPLMNLLSPCWKPFGQSDDSSSGIVGREGKDGLLWFRDIGKYGSGEFSMAVVQANQILEDQSQIESGPLGTFVGVYDGHGGPDAARYVCDHLFRNFQAVSSESRGVVTDETIQSAFRLTEEGFTARVSELWNTRPQVATTGTCCLVGVIYQQTLFVANLGDSRVVLGKKVGNTGGIAAIQLSTEHNANLEAVRHELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINPKFRLPEPMHMPILSANPSILSHPIHPNDSFLIFASDGLWEHLNNDQAVEIVHRSPRAGSAKKLIKAALQEAARKREMRYSDLRSIDKKVRRHFHDDITVIVLFLNHDLITRGTVQNPPLSIRSALNH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03244 372 ProSiteProfiles PPM-type phosphatase domain profile. 45 349 IPR001932 -
Tsu06g03244 372 PANTHER ALPHABET, ISOFORM E-RELATED 3 372 - -
Tsu06g03244 372 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Tsu06g03244 372 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 372 - -
Tsu06g03244 372 SMART PP2C_4 35 347 IPR001932 -
Tsu06g03244 372 CDD PP2Cc 49 349 IPR001932 -
Tsu06g03244 372 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Tsu06g03244 372 Gene3D - 39 358 IPR036457 -
Tsu06g03244 372 Pfam Protein phosphatase 2C 71 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03244 Tsu-Chr6 42966866 42974099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03244 1 302 PP2C-type Phosphatase Gene Family AT3G17090 69.231 1.91e-157 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03244 K01102 - gmx:100790813 640.188