Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03242 ATGGCATCATCTATGATCTCAAACACAACAATACCACCAACAACAACTGACCGATCACAcagaataaaaaagaagaaaaaagccCAATCAAAAGCCCAACAGGcccaagaacaacaacaaaggTTACAAAGCCATGCTAAATGGAGATCACAAGCCCAACAACAAATCTACTCTACAAAACTCCACCAGGCTTTATCAAGAGTCAATCTTTCTGGCGGGCCTCGCCGCGGTAAAGCCGTCCGTGAAGCCGCTGATAGAGTTCTCGCCACCGCAGCCAAAGGAAGAACACGGTGGAGTAGAGCTATACTAACAAACAGGCTGAGACTCAAATTCAGGAAACAGAAAAGAAATCATAATCAACAAAAAGCCTTTGGGCCGGCCCGGTCTAAAAAAGCCCGGTTCGGTGTTTTACGTCTTAAAGGTAAAACACTTCCGGCGGTTCAGAGAAAAGTTAAAGTTTTGGGCCGGTTAGTTCCTGGTTGTAGAAAAGAACCGTTACCGGTTATtcttgaagaagctattgattATATACCGGCTCTTGAGATGCAAGTTCGTGCCATGGCAGCTTTAGCTGATTTACTATTCggctcttcatcttcttccgcCGCCGCCGGCTCTAGTGATGGCTCCGGTTTACCGCCGCCGagttaa 651 0.4086 MASSMISNTTIPPTTTDRSHRIKKKKKAQSKAQQAQEQQQRLQSHAKWRSQAQQQIYSTKLHQALSRVNLSGGPRRGKAVREAADRVLATAAKGRTRWSRAILTNRLRLKFRKQKRNHNQQKAFGPARSKKARFGVLRLKGKTLPAVQRKVKVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMAALADLLFGSSSSSAAAGSSDGSGLPPPS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03242 216 MobiDBLite consensus disorder prediction 1 51 - -
Tsu06g03242 216 Coils Coil 25 45 - -
Tsu06g03242 216 CDD bHLH_AtIBH1_like 136 191 IPR044549 GO:0006355
Tsu06g03242 216 MobiDBLite consensus disorder prediction 1 16 - -
Tsu06g03242 216 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 13 207 - -
Tsu06g03242 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 195 IPR036638 GO:0046983
Tsu06g03242 216 MobiDBLite consensus disorder prediction 32 51 - -
Tsu06g03242 216 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 207 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03242 Tsu-Chr6 42957108 42958334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03242 45 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 54.011 3.85e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03242 - - gmx:100792237 238.424