Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03215 ATGGCCTTCTTTTCATTAACAAAATTTACATTTCTATTCTCCTTAACATTAACATTCCTCTTAATGTTAAACTCAACCAAACCCCAAACACTATCATCAAAACCATGCAACAATCCATACAAACAACTAAACCTTATCCTTAATCCAAATGGAACCATAACGCGACCAAACAAACCACCCGAGACCCCTCCCTCACTAGATCCAACCCTCCCCGTTCTCTCCAAAGATCTCATCATTAATCAATCAAAAGGCACGTGGGTGCGGATCTATGTACCCCGCGAAACACTTAATCAAACCTCCAAAAAACTTCCTCTTGTGATTTTTTTCCATGGTGGTGGGTTCATTTTTCTTAGTGCGGCATCAACGATTTTCCatgatttttgcttcaacatGGCAAATGACATTGAAGCAGTTGTTGCGTCGATTGAATATCGTCTTGCCCCAGAGCATAGACTCCCAGCTGCATATGAAGATGCAGTGGAGGCTCTGCATTGGATCAAAACTAATTATCAATCAGATGATTGGCTTAAAAATCATGTTGATTATTCTAGTGTTTTTCTTATGGGTAGTAGTGCAGGAGGAAACATAGCGTATAACGCAGGTCTCCGTGTAGAAGATGGAGATGGTGAAATTTCTAAGATGATTAAAGGACTTATACTAGTTCAACCTTTTTTTGGTGGAATCCATAGGACGGATTCCGAACTTAGGCATGTTAATGATTCTCACTTGTCATTGTGTAACAATGATATGTTGTGGGAATTGTCGTTACCCGTTGGTGCTAACCGTGATCATGAGTATTGCAATCCCATGATGGGAGGTAATGTTTTGAGATTGGAAAACATCAGACGACTTGGATGGAGTGTGTTGGTGACTGACTGTGACGGTGATCCACTCGTGGATCGTTCCATTGAGTTGGTGAGATTGATGAAGAAAAAGGGAGTAAGGGTTATGGGACATTTTACAAAAGGAGATTATCATGGTGTTCAAGATAGTGTGCCATTGAAAGCAAAGGAACTCTTTGTGGTGATTAAAAAGTTCATTTCATCTTTGCCTAATCAAGCAATTGAATGA 1071 0.395 MAFFSLTKFTFLFSLTLTFLLMLNSTKPQTLSSKPCNNPYKQLNLILNPNGTITRPNKPPETPPSLDPTLPVLSKDLIINQSKGTWVRIYVPRETLNQTSKKLPLVIFFHGGGFIFLSAASTIFHDFCFNMANDIEAVVASIEYRLAPEHRLPAAYEDAVEALHWIKTNYQSDDWLKNHVDYSSVFLMGSSAGGNIAYNAGLRVEDGDGEISKMIKGLILVQPFFGGIHRTDSELRHVNDSHLSLCNNDMLWELSLPVGANRDHEYCNPMMGGNVLRLENIRRLGWSVLVTDCDGDPLVDRSIELVRLMKKKGVRVMGHFTKGDYHGVQDSVPLKAKELFVVIKKFISSLPNQAIE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03215 356 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 106 122 IPR002168 GO:0016787
Tsu06g03215 356 PANTHER CARBOXYLESTERASE 120-RELATED 33 349 - -
Tsu06g03215 356 PANTHER ARYLACETAMIDE DEACETYLASE 33 349 - -
Tsu06g03215 356 Pfam alpha/beta hydrolase fold 106 328 IPR013094 GO:0016787
Tsu06g03215 356 SUPERFAMILY alpha/beta-Hydrolases 57 349 IPR029058 -
Tsu06g03215 356 Gene3D alpha/beta hydrolase 40 351 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03215 Tsu-Chr6 42670046 42671441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03215 50 318 Carbohydrate Esterase AT5G16080 39.350 1.15e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03215 - - mtr:MTR_6g464120 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03215 06 42670046 42671441 Tsu01g04492 01 52565913 52566842 PCT
Tsu01g04491 01 52562716 52563820 Tsu06g03215 06 42670046 42671441 PCT