Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03195 ATGGGTAAGGAAAGGTATTGGGTTGGAAAGTCTTCCAAAAAAAGTGTTATAGttgaagaaaatgaaacaagaacaacaacaacaccaccaAGTGGTTGCATGTGTGCTATTTTTCAATTCTTTGATTTTCATCCATTTCATTTTCCTAACTCCATAAATCATCAACAAGAAATCACTTCTTCTTGCATCTCAAAAGACCACACTACTACTATTGTCCCAAAAGGTGCTGAAGCTCCTAGGAATAGCTTGGAATCTAATGATGGTATAGTTTCAGCTTCtctttcaaaagaagaaaatttaaaaattccaatgaatatacaaattaaaacaaaaaggaGCAATGGTGGGAATTTGACTGATTTGTCCTCAGAAATAAGCACTTCACCAGGAACAAAGACACCAACTTTAGTTGCAAGATTAATGGGTTTAGAACTTCTTCCAAATCCAAACTCACCCACTTTTTCTTCACCTCTTTCAACACCAAATTCACAAAAGAAGAATAATATTATTCAACATCTTCACCAAGCAAGAAAttcaaaccaacaaaaaattcaaaccaaagCAAGAAATAGCATTGATAGTAGTGAAATTACAAGAATACCCTCATCTAGAAAATCAGATTTTTATCATCATAGACTCTCTCTTCAAATCAACAAAGAGAATAATCTTGGTGATGAGGATTTTGAGATGCCtagattttcattttcaaagaGGAAAATTGATGAGAATAATTGCATAACTCCAAGTGAACATGCAAAGCAAATTGTTAAACAAGTTAAGGAAAATGTTGCTAGTAGAAAAGTTGGTCAAGAAATTACCAACACTCTCAAAATCAAGCAGGATATCGGTACTCAACAAAACTTTAGGGTATCAAATAATTTACCAACCAAAGATCAAGAAGAATTTTTAGGACAATTAAGAACCAAGAAATGTCCTAAAACAACACCATTGAAAGATTCAAATCCTTCATCATGTTCACAAAGGATTAGATTCATAGAAAACAAACACAAGCCAAACACAACATCAAAAGATCAAAACACAAAACCACAGTCTTATGCATTGAAAGAAGAGCAAGAATCAAGGGACAAGAAATTGGTCCCAAAATGTAAGAAAGATACAAATGAAAAGTTTAGCTCAAGATTCAAAAGGCCTCCACAAACATCAGATATAAACGTTTGTCCAACATCAAATTCTAGAGCCAATGACATCAAAAGTAATGTCAAAAGCAAGAAAATTCAGCCATTATCAAGCAATCTCCTCAACAACATCAATGTTGTACAAAATGTTCTCTCTGTTAAGACAGAGTCTCCTCTGGCAACCAAAATTCATCAGAAACAGtcACAGGTATCTGCAACTCAATGTTGTTTTAGCCAACAAAGCTACAAACAAGAAGGAACAATCACACTCTCAacccaagaaacaagcaccaacGTCATTGAAGACAAATTTAACGGTATCTCTACCATAGAAACTCACAAAACAGAATTTCAGTACATCACAGAAATCTTAAACAAACATGtcacaaccacaacaacaaaaaatgtgtGTTTTAACACATGGTTCTCTCCAAAACATCCACTTGACCCATCAATCTTCAACCACCTTGAACGCAATTTCATCAATAAAGATCGAAACTTtaccacaaaaaataaattgggtCACAGTTGGAATCGAAAATTGATGTTCGATTTGGTGGATGAAGTTTTTCTAGAGATTTTGAAGTCAAAGTGtggtaaacaaaaaaatctatgtTTTTTGCAACGGTTTTGTGACCAGTTGACAATTACGGAATTAATTGAGAGAGTGTGGAAAAGGGTAGGAGAGTTTCCATGTGCGAAATGTGAAGTTTTGAATGACATTGATAATTTGATTGAATCGGAAGACATGGAGAAATTGATCAAGGTTGAaggtgaagaagaaagagaagagtTGGTGATGGAAATTGAAGGCAACATATTAGACACATTGATGTATGAAACTATTTTGGTTATGAGTATATGA 2001 0.3018 MGKERYWVGKSSKKSVIVEENETRTTTTPPSGCMCAIFQFFDFHPFHFPNSINHQQEITSSCISKDHTTTIVPKGAEAPRNSLESNDGIVSASLSKEENLKIPMNIQIKTKRSNGGNLTDLSSEISTSPGTKTPTLVARLMGLELLPNPNSPTFSSPLSTPNSQKKNNIIQHLHQARNSNQQKIQTKARNSIDSSEITRIPSSRKSDFYHHRLSLQINKENNLGDEDFEMPRFSFSKRKIDENNCITPSEHAKQIVKQVKENVASRKVGQEITNTLKIKQDIGTQQNFRVSNNLPTKDQEEFLGQLRTKKCPKTTPLKDSNPSSCSQRIRFIENKHKPNTTSKDQNTKPQSYALKEEQESRDKKLVPKCKKDTNEKFSSRFKRPPQTSDINVCPTSNSRANDIKSNVKSKKIQPLSSNLLNNINVVQNVLSVKTESPLATKIHQKQSQVSATQCCFSQQSYKQEGTITLSTQETSTNVIEDKFNGISTIETHKTEFQYITEILNKHVTTTTTKNVCFNTWFSPKHPLDPSIFNHLERNFINKDRNFTTKNKLGHSWNRKLMFDLVDEVFLEILKSKCGKQKNLCFLQRFCDQLTITELIERVWKRVGEFPCAKCEVLNDIDNLIESEDMEKLIKVEGEEEREELVMEIEGNILDTLMYETILVMSI 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03195 666 Pfam DUF761-associated sequence motif 122 150 IPR032795 -
Tsu06g03195 666 MobiDBLite consensus disorder prediction 354 379 - -
Tsu06g03195 666 MobiDBLite consensus disorder prediction 306 325 - -
Tsu06g03195 666 MobiDBLite consensus disorder prediction 333 397 - -
Tsu06g03195 666 MobiDBLite consensus disorder prediction 380 397 - -
Tsu06g03195 666 Pfam Domain of unknown function (DUF4378) 495 659 IPR025486 -
Tsu06g03195 666 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 665 - -
Tsu06g03195 666 MobiDBLite consensus disorder prediction 111 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03195 Tsu-Chr6 42393291 42396834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03195 104 660 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 30.221 4.59e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03195 - - mtr:MTR_6g089530 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03195 06 42393291 42396834 Tsu06g03195 06 42393291 42396834 ECH
Tsu06g03195 06 42393291 42396834 Tsu01g04484 01 52497846 52500658 PCT