Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03185 atgaaaaagaagaatggTGTTGATTCTTCATTTGGGTCCTCACTAACCCATGATATACATTCATTTGTTTTCCCCTATTTTTCTAGGTGGCAAAATTCTCATGgcaAAGTTTTCATCTATTGGCTAGGGACAGAACCTTTTTTATACATTGCAGATCCAGAATTCTTGAAGAAAATGTCCACAGAAGTTATAGCAAAGAGATGGGGAAAACCAAATGTGTTTAAAAATGATAGAGAACCTATGTTTGGAAAGGGTTTGGTGAtggttgaaggcaatgaatgGGTTCATCATAGGCATGTTATTGCCCCAACATTTTCTCCTCTTAACTTAAAGGCAATGTCAAGCATGATGGTAGAATCTACAAAGAAAATGATGGATAGATGGACTACTCGAATCAACTCCGGAAACCTCGAAATTGATATCGAAAGAGAGATCGTTGCAACCGCAGGAGAGATCATAGCAAGAACAAGCTTTGGTATAAATGATGAAAAtgcaagaaaaatatgtgaaaaattacgTACCCTACAAATAGCACTTTTCAAGACAACAAGATATGTAGGTGTTCCATATATTAAGTTCATTGACATCAAAAAAACTATAGAGAACATGAAACTTGGGAAGGAGATAGATAAACTTTTGCTTTGTTTCATAGAAAGTAGAAAGGAATCAAAAGTGGAAAGAAAAGGTAGAGAAGATTTATTGGATTTGTTGTTGCATGAAAATCAAGTTGATGGAAAGTATGGGAAAAAATTGAGCACAAAAGAATTGGTAGATGAATGCAAGACATTCTTCTTTGCTGGCCATGAGACAACAGCATTGGCCATTTCTTGGACTTTGATGCTTTTAGCTATTCATGAAGATTGGCAAAATCAATTGAGAGATGAGATAAGAGAAGTGGTTGGTGATCAAGAAGTTGATATCAATGTGCTTGGTGGTTTGAAAAAgATGAAGTGGGTGATGAATGAAGTTCTAAGGCTCTATCCAACAGCACCAAATGTTCAAAGGCAAGCTAGAGAAGACattaaatttgataatttaactATTCCTAATGGGACCAACATTTGGATCGACGTTGTCGCGATGCACCACGATCCATTGTTGTGGGGAGAAAATGTGAATGAGTTTCGACCAGAAAGGTTCATGGATGATGTAAATGGTGGATGCAACAAAACATTGGGGTACTTACCTTTTGGGTTTGGAGGAAGAATGTGTATTGGTAGAAACTTGAGCTTCATGGAGTATAAGATAGTGTTAACCCTTCTTCTCTCTAGATTTACCTTTAAAATTTCCCCAACTTATATCCATTCACCGTCTTTTATGCTCTCACTAAGGCCAGCTTATGGACTCCCTCTAATAGTCCAGCCCCTTTAG 1371 0.3523 MKKKNGVDSSFGSSLTHDIHSFVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVIAKRWGKPNVFKNDREPMFGKGLVMVEGNEWVHHRHVIAPTFSPLNLKAMSSMMVESTKKMMDRWTTRINSGNLEIDIEREIVATAGEIIARTSFGINDENARKICEKLRTLQIALFKTTRYVGVPYIKFIDIKKTIENMKLGKEIDKLLLCFIESRKESKVERKGREDLLDLLLHENQVDGKYGKKLSTKELVDECKTFFFAGHETTALAISWTLMLLAIHEDWQNQLRDEIREVVGDQEVDINVLGGLKKMKWVMNEVLRLYPTAPNVQRQAREDIKFDNLTIPNGTNIWIDVVAMHHDPLLWGENVNEFRPERFMDDVNGGCNKTLGYLPFGFGGRMCIGRNLSFMEYKIVLTLLLSRFTFKISPTYIHSPSFMLSLRPAYGLPLIVQPL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03185 456 Gene3D Cytochrome P450 3 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 Pfam Cytochrome P450 22 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Tsu06g03185 456 SUPERFAMILY Cytochrome P450 20 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 1 451 - -
Tsu06g03185 456 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS E-class P450 group I signature 31 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS E-class P450 group I signature 317 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03185 456 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03185 Tsu-Chr6 42134031 42183885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03185 7 456 Cytochrome P450 AT5G52400 62.832 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03185 - - gmx:100810679 739.569