Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03150 ATGCCACTGCCAGCTGCAAAACTCAAGGCCTCTGACACTCCAGATGTCATGCGAACAGAAGACGGAATAGATACCATAATCAGACAAGCAATTGGCAAAGATTCTATACTTTATTTTCCAAGGGGCAATGACAACCCAGGACAGTTGATTCAATTACTTAATGCTTTTGATCCTCAAGGTGTTACCAACATTTATTCAGAATATCCAGGGTGGCCTTTGCTCTATCCTCTGAAGGCTCCATCAGACAAATGTGAGAAATGTTCTCAAGAGTTTTGCTCCACCATTAACTATAGAAGACATTCACCTGTACATCACCGATTCAAAAATCTTGATAAGGATTCTTCCAAAACCAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTGCAGAAGAGGCGAAGGAAGTTCTATCTTTCGAAAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCGATTTTGAATGCTTTGATGACTCTTAATCAAAAACaaggattttttttacttcCGCAATGTTATATGAGGGCTGGTGTTGCCCTATTGGATATTCTTCAATCTAAAGCTTCCAGTTTTCCTATACCTTCCCGGGAATTGTTCAGTATCCTAGATGATGCCAGTGAAAGAACATTTTTATTGGGGACAGCAGTGTCAatgcaaaaacatgtttttcATGGAGGGGCTGGAAAAATTGGTGTTCAACCCAGAAACATAGTTGCTTGCATAAGCTTCTTGCTAGAACAGATATTGGTTAAGGCATGGCTTGCTGACAAGGATGCTGAAGCACTGAGGTGCCAGAAACAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGGTTTTGAAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAGCAGCGGGCTAGGGAACAAAGACAGAAGCTTGAGGAAGAAACTAAAGGGAATGTTGACAGTACACTGAAGACTCTCTCACCAGCAGAAACGTTTTTGGATACATATGATTTTGAAGCTCAAAATCCAGAGGAGTTTACAAATAACACTCCTTCACATGTACTTTTTCAATTCCCTGATGTTAATGAAGGAAAAGATGGGGATACTCCATCTGGACTTGCTTTTGGCTCTGATCAGATTGTTGAAAAGGCAGAACGTGAACTTGATCATCCGTGCAGAGCAGTTACAAGATGGCAGGAGCCTCCAAAATCCCTCCAACGCACGGTAGTTAGTGATCTGCATACAAACAAGAATCCTCCAATTTTAACACCTGAAGTCATTCAGAGATATGGAACCTGCAATGATCATAGGGAAGATGCTATGGTTAATGCTGGTAAAGCATTGAATAGGAAGCCAAAACCTGAAATGGACATAGCAAAGACTGAACCAGACCCAGTTAAGAATCATGAAGTTTTGATCGGATCTATATCCCTCAATCTAGGAAAATGCAGCCAATCTGAGGGTAATGTGGTGGCAGCTCAAGAAGACTCCTCGGTTGAGAATGTGgatagccagaatagttctcaGGATAAACCAAAGAAACCTGATTTAGTCAAGAGTGGAAACAATCAAGCAACAGTTGAGACTTCAACACCAGTTAGTCAGTTTGAAACTAAAGATTCATTTACAGTTCAAAGTCATGGGACAGAAGTTGATGCAGCTAGTAGAGATGAAGGTTGTCAAAACTTGTCAAAGTTGGCTAGTGATGGTACCGACGCTGGTTTTAAAAAGATAATCTCCAATCTCGTGGGTCACGTAGATCCAGGAAAGTTCCAGTTTAACAGCCAGGCTGCAAAAGCCTTTCTTGCACAAAGATGGGAAGAAGCTTTATCATCAAATCATGTGAAATTGGTTATTTCTTATGACTCTGAACCTCCTGGGAGCCAGCAGGCTGGGAGCCAGGAGATACATGATTTGGAGGTAGTATTAGCATGTGAATCTTCTGATGGTGATGATGGATGCAGCAACATTCCGGCAAAAACAGTTAACAAGTTGCTTTCAACTACAAAAGCTTCAAAGTCCAAACGCAGAGGGAAGTCTAAAAAGGGAACCAATTACAAGTATATTCCAAAAGAGTAA 2058 0.4057 MPLPAAKLKASDTPDVMRTEDGIDTIIRQAIGKDSILYFPRGNDNPGQLIQLLNAFDPQGVTNIYSEYPGWPLLYPLKAPSDKCEKCSQEFCSTINYRRHSPVHHRFKNLDKDSSKTRDLLGAYWDKLSAEEAKEVLSFENVMLEEVPGSSILNALMTLNQKQGFFLLPQCYMRAGVALLDILQSKASSFPIPSRELFSILDDASERTFLLGTAVSMQKHVFHGGAGKIGVQPRNIVACISFLLEQILVKAWLADKDAEALRCQKQLVEEEEAAQKRQAEVLKRKRQKKLRQKEQRAREQRQKLEEETKGNVDSTLKTLSPAETFLDTYDFEAQNPEEFTNNTPSHVLFQFPDVNEGKDGDTPSGLAFGSDQIVEKAERELDHPCRAVTRWQEPPKSLQRTVVSDLHTNKNPPILTPEVIQRYGTCNDHREDAMVNAGKALNRKPKPEMDIAKTEPDPVKNHEVLIGSISLNLGKCSQSEGNVVAAQEDSSVENVDSQNSSQDKPKKPDLVKSGNNQATVETSTPVSQFETKDSFTVQSHGTEVDAASRDEGCQNLSKLASDGTDAGFKKIISNLVGHVDPGKFQFNSQAAKAFLAQRWEEALSSNHVKLVISYDSEPPGSQQAGSQEIHDLEVVLACESSDGDDGCSNIPAKTVNKLLSTTKASKSKRRGKSKKGTNYKYIPKE 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03150 685 MobiDBLite consensus disorder prediction 512 529 - -
Tsu06g03150 685 Coils Coil 258 310 - -
Tsu06g03150 685 MobiDBLite consensus disorder prediction 482 499 - -
Tsu06g03150 685 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 685 - -
Tsu06g03150 685 MobiDBLite consensus disorder prediction 482 529 - -
Tsu06g03150 685 MobiDBLite consensus disorder prediction 293 312 - -
Tsu06g03150 685 MobiDBLite consensus disorder prediction 663 677 - -
Tsu06g03150 685 ProSitePatterns Zinc finger C2H2 type domain signature. 84 105 IPR013087 -
Tsu06g03150 685 MobiDBLite consensus disorder prediction 282 314 - -
Tsu06g03150 685 MobiDBLite consensus disorder prediction 661 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03150 Tsu-Chr6 41827065 41837916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03150 21 685 C2H2 Transcription Factor Family AT4G25610 37.389 1.97e-116 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03150 - - mtr:MTR_6g053660 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03150 06 41827065 41837916 Tsu06g03150 06 41827065 41837916 ECH
Tsu06g03150 06 41827065 41837916 Tsu01g04398 01 51805091 51810255 PCT