Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03145 atggaaaGCGCAACCACCCTCACCGGACTCCTCCAAGCCGTCGCTGAAAAATTCCCTTCCCGACGTGCCATCTCCGTCGCCGGAAAACTCGACCTCACTCACTCTCACCTCAATCAACTAGTCGAATCCGCCGCTAATCATCTCACCTCCGCCGGAATTAAACCTAACGACGTCGTTGCTCTCACTTTCCCTAACACCGTCGAGtaTGTTATACTATTTTTGGCTGTTATTCGAGTACGAGCTACGGCGGCGCCGTTAAACGCGGCATACACATCAGaagaatttgagttttatttatcAGACTCTGAATCGAAGCTTCTATTAACGCCATTAGAAGGTAACGAACCGGCTCAAGCCGCAGCtacaaaactcaaaattcaACTCGGCTCGGCTTCGTTAATCAAAActactgaagaagaagaaactaaattttcattttcaatctcgTTGAACAAATCCGAGTCAGAGTTAAATTCAGTTAACTCAGTTAACTCGGTTTCCGAACCCGAACTCATTAACGAACCATCCGACGTGGCACTTTTTCTTCACACATCAGGAACAACGAGTCGACCTAAGGGAGTTCCACTGAGTCAACACAACTTAGTTTCATCTGTTAGAAACATTGAATCGGTTTATCGACTCAGTGAGTCAGACTCGACGGTTATTGTTCTTCCGCTTTTCCATGTTCACGGATTAATTGCTGGATTACTGAGTTCACTTGGTGCCGGAGGTGCGGTGGCGTTACCATCGGCGGGAAGATTCTCGGCGTCGACGTTTTGGAAAGATATGATTCAATACAATGCCACATGGTATACTGCGGTTCCAACTATACATCAGATTATACTTGATCGTCATTTGAATAACCCTGAACCGGTTTACCCGAGACTCCGGTTTATCAGAAGCTGTAGTGCTTCCTTGGCACCGGTTATTCTAGGTCGTTTAGAGGAAGCCTTTGGGGCACCAGTTTTGGAGGCATATGCTATGACAGAGGCAACTCATTTGATGTCTTCAAATCCTTTGCCACAAGATGGACCCCACAAAGCTGGGTCAGTTGGTAAACCAGTGGGTCAAGAAATGGCTATATTGGATGAATCGGGTCGGATTTTGGAGAAAGAAGTGAATGGTGAAGTGTGTATTAGAGGAGAAAATGTTACAAAAGGATATAAGAATAATGAGGAAGCTAATACAGCTGCGTTTTTGTTTGGCTGGTTTCATACTGGTGATATTGGTTACTTCGATTCTGATGGGTATTTGCATCTTGTGGGTCGGATTAAAGAGCTCATAAACAGAGGAGGAGAGAAAATATCACCAATAGAAGTGGATGCTGTTCTTCTATCTCATCCTGACGTAGCACAAGCAGTTGCATTTGGAGTGCCAGATCAGAAATATGGGGAAGAGGTTTgtctttttctcattttaatatttCCTCTCACATGTGTACATAATCTTCATTTGATTGAACTATACCACAAATATGGTGTcacattttatcttttaaataaagaaCTTGAGATTTCTGTTGTAAAGAACTTGTGA 1536 0.4115 MESATTLTGLLQAVAEKFPSRRAISVAGKLDLTHSHLNQLVESAANHLTSAGIKPNDVVALTFPNTVEYVILFLAVIRVRATAAPLNAAYTSEEFEFYLSDSESKLLLTPLEGNEPAQAAATKLKIQLGSASLIKTTEEEETKFSFSISLNKSESELNSVNSVNSVSEPELINEPSDVALFLHTSGTTSRPKGVPLSQHNLVSSVRNIESVYRLSESDSTVIVLPLFHVHGLIAGLLSSLGAGGAVALPSAGRFSASTFWKDMIQYNATWYTAVPTIHQIILDRHLNNPEPVYPRLRFIRSCSASLAPVILGRLEEAFGAPVLEAYAMTEATHLMSSNPLPQDGPHKAGSVGKPVGQEMAILDESGRILEKEVNGEVCIRGENVTKGYKNNEEANTAAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDVAQAVAFGVPDQKYGEEVCLFLILIFPLTCVHNLHLIELYHKYGVTFYLLNKELEISVVKNL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03145 511 CDD FACL_fum10p_like 19 473 IPR045310 GO:0016874
Tsu06g03145 511 PANTHER OXALATE--COA LIGASE-LIKE 1 468 - -
Tsu06g03145 511 Gene3D - 5 423 IPR042099 -
Tsu06g03145 511 Gene3D - 425 483 IPR045851 -
Tsu06g03145 511 PANTHER ACYL-COA SYNTHETASE 1 468 - -
Tsu06g03145 511 SUPERFAMILY Acetyl-CoA synthetase-like 5 473 - -
Tsu06g03145 511 Pfam AMP-binding enzyme C-terminal domain 439 473 IPR025110 -
Tsu06g03145 511 ProSitePatterns Putative AMP-binding domain signature. 181 192 IPR020845 -
Tsu06g03145 511 Pfam AMP-binding enzyme 12 430 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03145 Tsu-Chr6 41755699 41762955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03145 5 472 Monolignol Biosynthesis Gene Families AT4G05160 29.979 9.44e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03145 K22133 - gmx:100779306 715.687