Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03109 ATGTTAACTTTTCTAAATGAAACCTTCTTATTTTGGTTCGTCCTATGTATCCTTACATTCACCATCATCATGTTACTATCACTACCAATAAGGAATTCAAACTCTTCAATCAACAAAAACTCACCACCACCTTCTCCTCCAAAACTTCCAATACTAGGAAATCTCCATCAACTATCCACTTTCACTCACTACAAACTCAAATCCTTAGCTCAAATCTATGGTCCCTTAATGTTACTTCACTTTGGCAATGTTCCAATTCTTATTGTCTCAAATTCTATAGCTGCATGTGAAATCCTCAAAACATATGACCTTGATTTTTGTAATAGACCACATAGAAAGATGTTTGATATCTTTTGGTATGGTTCAAAAGATATAGCATCAGCTCCTTATGGTGACTATTGGAGACAAATAAGGAGTATATGTGTTTTGCATCTTCTTAGTGCCAAAAAGGTTCAATCTTTTTGTGTAGTAAGAGAAGAGGAAAGTATAATAATGATTGAAAAGATTAGAAAGTGGTGTTCTAATTCTTTGTTGCAACCAATGAACTTAACTAATTTGTTATGTGAAACAACTAATGATATTGTGTGTAGAGCAACACTTGGAAAGAGATATAGTGATGATAGTGAGGGAAAACTTAGGGAAGCAGTGGCTGAGTTGGAAGTTTTGTTAGGTGCTTCTATTTTCGGGGATTATGTACCTTGGCTTGATTGGTTGGGAAAAGTTAATGGTTTGTATGGTAGAGCAAAAAGAGTTGCTAAGGTGTTTGATGAATTTTTGGATCAAGTTGTTGAAGAGCATGTTAGTGATTGGTTGAAGAAAGGTAAAAAGGGACTTGGTGATTTTGACCATGAAGAACATAATGATTTTGTGGATGTTTTGCTTTGGATCCAAAGGACTAATGCCACTGGATTTGAGATTGATAGGACAGTCATCAAGGCCTTGATCATGGATATGTTTGCCGCAGGTACAGATACTACCCTTGCAGTCTTAGAATGGACAATGACAGAACTTTTAAGGCACCCAAATGTGAtgcaaaaattacaaaatgagATAAGAAATGTGGTTAGCCAAAAAACTCATATAACTGAGCAACATTTGAACAACATGCATTACTTAAAAGCAGTAATTAAAGAAACTCTTAGATTACACCCACCATCACCATTACTAATTCCTAGAGAATCAAGACAAGACACAAAAATTATGGGCTATGATATTGCAGCTGGAACACAAGTAATAGTTAATGCATTTGCAATTTCAACAGATTCTTCTTATTGGGATCAACCTTTAGAATTTCAACCTGAGAGATTCTTGAAAAATGTAGATATTAAAGGAAATGATTTTCATTTGATTCCATTTGGAGCTGGAAGAAGAGGTTGTCCTGGAATAAGTTTTGCTATGGTTGTTAATGAGTTGGTTTTGGCTAATCTTGTTCATCAATTTGATTGGTCATTGCCTAATGGAGTGGAGAGGGATATGAGTTTGAATATGTCTGAAACTAATGGGTTAACCATTCATAGAAAATTTCCTCTTATGGCTATTGTATCTCCACATTTATAA 1557 0.3449 MLTFLNETFLFWFVLCILTFTIIMLLSLPIRNSNSSINKNSPPPSPPKLPILGNLHQLSTFTHYKLKSLAQIYGPLMLLHFGNVPILIVSNSIAACEILKTYDLDFCNRPHRKMFDIFWYGSKDIASAPYGDYWRQIRSICVLHLLSAKKVQSFCVVREEESIIMIEKIRKWCSNSLLQPMNLTNLLCETTNDIVCRATLGKRYSDDSEGKLREAVAELEVLLGASIFGDYVPWLDWLGKVNGLYGRAKRVAKVFDEFLDQVVEEHVSDWLKKGKKGLGDFDHEEHNDFVDVLLWIQRTNATGFEIDRTVIKALIMDMFAAGTDTTLAVLEWTMTELLRHPNVMQKLQNEIRNVVSQKTHITEQHLNNMHYLKAVIKETLRLHPPSPLLIPRESRQDTKIMGYDIAAGTQVIVNAFAISTDSSYWDQPLEFQPERFLKNVDIKGNDFHLIPFGAGRRGCPGISFAMVVNELVLANLVHQFDWSLPNGVERDMSLNMSETNGLTIHRKFPLMAIVSPHL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03109 518 PANTHER CYTOCHROME P450 71B11-RELATED 16 515 - -
Tsu06g03109 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 16 515 - -
Tsu06g03109 518 Pfam Cytochrome P450 43 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Tsu06g03109 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 Gene3D Cytochrome P450 30 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g03109 518 Coils Coil 344 364 - -
Tsu06g03109 518 SUPERFAMILY Cytochrome P450 43 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03109 Tsu-Chr6 41134115 41145158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03109 13 518 Cytochrome P450 AT3G48280 46.260 2.39e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03109 - - gmx:100813357 672.159