Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03107 ATGAGTACCTTCTCAGTTGTAACACTGGGAGTACTGAAATCTAGGAATATATTGCTTCTTCTTTGTTTCAGTGTCTTCTATTATGCAGTGATTGGTGCACTTGAGACTTGCCCTGCTACCAATGTTGAATACATTCTTCCTAAGCTGTATGTGAAGATGCAGTACTGTATTTCATGTGCCATTCACTCTCATGTTGTGAGGGTCAGATCTCGCACTGATAGGAGGAAGCGTGAACCTCCACATTGTTTCATCAGGCGCAGGAATAATAAGTGGGAGGAAATCAGAATAGGTGAAGAACCTGAAGCTAAAATGAAAGATCATCAACTCCTGCATATGAGAATTCTAGAGAATGCTAGCAGTCCTCTACCTATTTGGTTGAAAGATCATCAACCAATGTTCAAGTACGGAGTTGTTCGAATGCATGACTTACTTCAAGATGTGGAGTGTTGGGAGAAATCCTACTTGTGCGATCATTACATCATTCTTTGTTGGTTATAA 498 0.4036 MSTFSVVTLGVLKSRNILLLLCFSVFYYAVIGALETCPATNVEYILPKLYVKMQYCISCAIHSHVVRVRSRTDRRKREPPHCFIRRRNNKWEEIRIGEEPEAKMKDHQLLHMRILENASSPLPIWLKDHQPMFKYGVVRMHDLLQDVECWEKSYLCDHYIILCWL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03107 165 Pfam Ribosomal protein S26e 43 88 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tsu06g03107 165 ProSitePatterns Ribosomal protein S26e signature. 55 62 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tsu06g03107 165 Gene3D Ribosomal protein S26e 29 95 IPR038551 -
Tsu06g03107 165 PANTHER 40S RIBOSOMAL PROTEIN S26 33 101 - -
Tsu06g03107 165 PANTHER 40S RIBOSOMAL PROTEIN S26 33 101 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03107 Tsu-Chr6 41108597 41111120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03107 44 98 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 61.818 1.16e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03107 K02976 - gmx:100808790 78.1814