Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03083 ATGGAaggtgatgattttgatgttgattttgAATCGAATGATGACGAGACTTATTTAGTATCAAGTGAGGATGAAAGTACAGAGGATGGCGATTGTGCATCTGATAATGGCATTGATGAAGGAGATGTAAATGTAGCTGATAGTCTGGTAAGTTTTGATTCCATAACTGCCGATCAAATTCGATCTATGGAATTTTCTACTCTTGATCAAGCTTATAACTTTTATTGCCAGTATGGGAAAAGTAAAGGTTTTGCTGTTGGGAAAAGTGACAGTAGGATAAGAGAAGGGCCTGAAGGTGAAAAACTAATAGTAGTAAAGCAGTTTGTATGCAACAAAAATGGattaagagagaaaaaacacTTGTGTAGGACAGATAGGAAATTAGAGCTTAGACGTATGAGCCGTACTAAATATCTAGCTAAGCTTCGTGTGAAACTATACCttgaaaaagatatatataaagTTATAGGGTTTGTAGAGAGGCATAACCATGAATTAACCCCGTCTAGGTTGGTGCACTTATACCCCGTGTATCGTAAAATTTCTGAGGCCGATAAGGCTCAGATTGATGGTCTGCATACACGGGGAATTAGAACATGTCATATTATGGGTCACATGGTTGCACAAAAGGGTGGTTATGTTGATGTTGGATTTACAAAGAAAGATTTGTACaactattttgataaaaaaatgcgtGCTATTATTAAAGATGGTGATGTTGCTGCCGCATTAAATTATCTAAACATGAAGAACTACGTGGCTTTGAGAGATTATAGAAATAATGAAATGGTTTCTGATTTTAAATCATCAACTACAGATCCTGTGTTGACAACTCAACTGCAAGTGATTGAGAGTGAGGCCGCTAAAATGTATACAACTGCTCTTTTTCAGTGA 894 0.34 MEGDDFDVDFESNDDETYLVSSEDESTEDGDCASDNGIDEGDVNVADSLVSFDSITADQIRSMEFSTLDQAYNFYCQYGKSKGFAVGKSDSRIREGPEGEKLIVVKQFVCNKNGLREKKHLCRTDRKLELRRMSRTKYLAKLRVKLYLEKDIYKVIGFVERHNHELTPSRLVHLYPVYRKISEADKAQIDGLHTRGIRTCHIMGHMVAQKGGYVDVGFTKKDLYNYFDKKMRAIIKDGDVAAALNYLNMKNYVALRDYRNNEMVSDFKSSTTDPVLTTQLQVIESEAAKMYTTALFQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03083 297 MobiDBLite consensus disorder prediction 1 40 - -
Tsu06g03083 297 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 11 207 - -
Tsu06g03083 297 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 207 - -
Tsu06g03083 297 MobiDBLite consensus disorder prediction 1 36 - -
Tsu06g03083 297 Pfam FAR1 DNA-binding domain 73 167 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03083 Tsu-Chr6 40572578 40573587 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g03083 FAR1 1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03083 - - mtr:MTR_7g446520 229.565