Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03081 ATGACAAGATTTCACGGCAGCGAGCGAGATGATGAGACTGGTATGGCGGCGGGATTTCATTACAGGAAGATGACCATCATCATCAGAGATAAAGAGAGTAGTGAGAGACGGTGGGTTCACAAGGAGAGGAGTATTGAAAAGAATGGAACAAGCATTGATGATCAAGTCTATTATTTGGATGTGACAAAAGTTTTTGGTGCTGTTTTGATTTCAAATATCTCCGGTACATACTATTCACGAAATAGTTTTGCAACCATCATTGTTGATCCAATTTATGGGGAAATTATAAAATCTTACATCAAGAGTTATGACAATTTTAAGCACGCTACTTCAGTTGCAAACATGTCATTCATGGAAACTGGTTTTGATGTTAAACCAGCAGCTAGGGTTAGTTCTTATAGTTCAAGAGGCCCATCATATAGTTGTCCATTTGTGTTGAAACCTGATATTACTGCACCTAGTACTGCGATCTTAGCAGCGTGGCCTACAAATGTTCATGTGTTAGAATTGAAGTCTCAAAAGTTTTTCAGCGAATTTAATATTATAAGCAGAACATCTATGGCGTGTCCTCATGTTGCAGGTGTAGCGGCACTTATAAAAGGTGCACACCGTGATTGGAGCCCTGCTGCTATTCGGTCGGCTATAATGACAACATCTTACATATTTGATAATACTAAGGAACAAATCAAAGACATTGGAACAGGTGAGAAAGCAACACCTTTTACATTAGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTACGATGTTGATGTACATGATTATGTTAATCTTCTTTGTGCACTTAAATACTCAAAAAGAAACATCACTACCATTACAAGATCTTCATCCAATGATTGCTCTAAACCTTCATTGGATCTCAACTACCCTTCATTTATTGCTTTTTTCAATGGTGGAAACTCTTCTTCAAGTACTGTACAAGAATTTCATAGAACAGTGACTAATGTTGGCGAGGGACAAACAATTTATGTTGCTAGAATTACTCCAATTAAAGGGTTGCATGTCAGTGTTATTCCAAACAAGTTGGTGTTCAATGAGAAGAATGAGAAGTTAAGTTACAAGTTGAGGATTGAAGTTGCAAGAATGACAAAGTTAAAGAAAGTGGCTTTTGGATATCTAACTTGGATGGATGTGAAGCATGTTGTTAGGAGTCCAATTGTGGTCACAACCCTCAAATTGAAATCCTAG 1224 0.3775 MTRFHGSERDDETGMAAGFHYRKMTIIIRDKESSERRWVHKERSIEKNGTSIDDQVYYLDVTKVFGAVLISNISGTYYSRNSFATIIVDPIYGEIIKSYIKSYDNFKHATSVANMSFMETGFDVKPAARVSSYSSRGPSYSCPFVLKPDITAPSTAILAAWPTNVHVLELKSQKFFSEFNIISRTSMACPHVAGVAALIKGAHRDWSPAAIRSAIMTTSYIFDNTKEQIKDIGTGEKATPFTLGAGHVNPNRALDPGLVYDVDVHDYVNLLCALKYSKRNITTITRSSSNDCSKPSLDLNYPSFIAFFNGGNSSSSTVQEFHRTVTNVGEGQTIYVARITPIKGLHVSVIPNKLVFNEKNEKLSYKLRIEVARMTKLKKVAFGYLTWMDVKHVVRSPIVVTTLKLKS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03081 407 Pfam Subtilase family 108 227 IPR000209 GO:0006508|GO:0008236
Tsu06g03081 407 ProSiteProfiles Serine proteases, subtilase domain profile. 1 254 - -
Tsu06g03081 407 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 49 404 IPR045051 -
Tsu06g03081 407 Gene3D - 59 122 - -
Tsu06g03081 407 Pfam Fibronectin type-III domain 298 400 IPR041469 -
Tsu06g03081 407 Gene3D Peptidase S8/S53 domain 123 267 IPR036852 GO:0004252|GO:0006508
Tsu06g03081 407 Gene3D - 271 403 - -
Tsu06g03081 407 PANTHER PUTATIVE-RELATED 49 404 - -
Tsu06g03081 407 SUPERFAMILY Subtilisin-like 83 258 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03081 Tsu-Chr6 40522942 40525014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03081 94 407 Subtilisin-like Serine Gene Family AT5G67090 45.455 1.67e-79 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03081 - - gmx:100781249 452.21