Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03009 ATGGGTAAAGGTGGAATGTCAGTTGATGATGATCAACAGAACATGGCTGCTTGGCTTGTTGGTTTAAACACTCTCAAGATTCAACCTTTCAATCTTCCTTCTCTTGGACCCCATGATGTCAGAATTAGAATGAAAGCTGTTGGAATCTGTGGGAGTGATGTTCACTACCTCAAGACAATGAGATGTGCAGATTTTATAGTTAAAGAACCGATGGTTATTGGTCACGAGTGTGCTGGGATAATAGAAGAAGTCGGTAGTCATGTACAGAATTTGGTGCCTGGTGACCGTGTGGCGATCGAGCCTGGGATCAGCTGTTGGCGCTGTGACCATTGCAAACTTGGTCGATATAATCTTTGCCCTGAGATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCGTTGGCTAATCGGATAGTACATCCAGCAGACCTATGTTTTAAATTACCAGACAATGTGAGCTTGGAGGAAGGGGCAATGTGTGAACCATTGAGTGTCGGTGTTCATGCTTGTAGGCGAGCTAATATCGGACCGGAAACAAATGTTGTGATTATGGGAGCAGGACCTATCGGACTTGTCACAATGCTTTCGGCTCGCGCTTTTGGTGCACCTAGGATTGTCGTGGTGGATGTGGATGACCATCGTTTATCTGTTGCAAAAAGTCTTGGTGCAGATGATATTGTTAAAGTTTCAACAAACATTCAGGATGTAGCTGAAGAAGTTAAGCAGATTCATAATGTTATGGGAGCTGGTGTAGATGTTACCTTTGATTGTGCTGGTTTTAACAAAACCATGACTACAGCATTGAATGCTACTCAACCAGGTGGCAAAGTTTGTCTAGTTGGAATGGGTCATTCCGAGATGACTGTGCCACTCACACCAGCTGCTGCAAGGGAAGTTGATGTAGTTGGCATTTTCCGCTATAAGAATACATGGCCTCTATGCCTCGAGTTTTTGAAGAGTGGCAAAATTGATGTAAAACCACTTATAACTCATAGGTTTGGATTTTCACAAAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGGGGAGGTAATGCTATTAAGGTCATGTTTAATCTTTAG 1083 0.4312 MGKGGMSVDDDQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIRMKAVGICGSDVHYLKTMRCADFIVKEPMVIGHECAGIIEEVGSHVQNLVPGDRVAIEPGISCWRCDHCKLGRYNLCPEMKFFATPPVHGSLANRIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVVIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVKQIHNVMGAGVDVTFDCAGFNKTMTTALNATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGIFRYKNTWPLCLEFLKSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03009 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 324 IPR036291 -
Tsu06g03009 360 CDD sorbitol_DH 16 359 IPR045306 GO:0016616
Tsu06g03009 360 PANTHER L-IDONATE 5-DEHYDROGENASE 9 360 - -
Tsu06g03009 360 SUPERFAMILY GroES-like 14 186 IPR011032 -
Tsu06g03009 360 Pfam Zinc-binding dehydrogenase 188 318 IPR013149 -
Tsu06g03009 360 SMART PKS_ER_names_mod 21 358 IPR020843 GO:0016491
Tsu06g03009 360 Gene3D - 165 305 - -
Tsu06g03009 360 Gene3D - 25 346 - -
Tsu06g03009 360 Pfam Alcohol dehydrogenase GroES-like domain 37 148 IPR013154 -
Tsu06g03009 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Tsu06g03009 360 PANTHER SORBITOL DEHYDROGENASE 9 360 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03009 27 293 Monolignol Biosynthesis Gene Families AT4G37980 26.978 6.82e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03009 K00008 - gmx:100820630 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03009 06 39603819 39608213 Tsu06g03009 06 39603819 39608213 ECH