Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03006 ATGTGTCTTCTTAACTCTGTTGTTCCTAAATTGCAGAGAGTTGCCATTGGCAAAGCTCTTTTAAAGAATGCTCCTATCCTTATAGCTACAAGTGCCTTGGATACCGTCACTGAGCGCTTCGTCGGTGAGACTCTCAACCGCTTGACGAAGGACAGGACAACATTAGTCATATTAAGTTCAGTACAAAATGCATTACAAATTGCACTCTGTTCTAATGGGAGAAATACAAAAGTGAAATTGCACTCTTTTATCCTTCACGTATATTGCCCTGAAATGTTAGGAACTTGGTCAATAAGATTATCCTGTGAATACTACCCCTCTGCTTTTCCTTCGTGGGAGCTTTTATCGAACAACCCCTCATTCCACCCCGCAATCGCAATGCCGCCATCATCCGCCGTACTAGAGACAACTTGCAATTGTTCTTCGTCCAACAGAACTTCTTCCTCTGCCGTTGAAGCTTCAAACTGGGAATCAGGATAA 480 0.4292 MCLLNSVVPKLQRVAIGKALLKNAPILIATSALDTVTERFVGETLNRLTKDRTTLVILSSVQNALQIALCSNGRNTKVKLHSFILHVYCPEMLGTWSIRLSCEYYPSAFPSWELLSNNPSFHPAIAMPPSSAVLETTCNCSSSNRTSSSAVEASNWESG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03006 159 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 12 87 - -
Tsu06g03006 159 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 12 87 IPR039421 -
Tsu06g03006 159 Gene3D - 12 74 IPR027417 -
Tsu06g03006 159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 81 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03006 Tsu-Chr6 39492084 39493876 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03006 12 85 Calmodulin-binding Proteins AT2G36910 40.000 1.25e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03006 K05657 - egt:105971655 88.1965