Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03000 ATGTCTTTTAAACGGCATGATACAATTTCTCAATTTAGAACATGCATATATTTGCCTCCACGGGTAAATTCGCAGACACCATGGTACGGAATGATCGAAACTCGCTCATTTTTAGTATATTCTTTACCTGTGATGGAGATGCAAATGTGTTTGATCTTTTTTGGAACACTTTTCTTCAAATCTATATTATGTCGTTTAGGAATCCCCAAGTTCACTTCTATGAGCATTGTTGGCCTAATCTTTGCAACTACATTCAATAAAAATTGGACcggaaaaatgaaaatgttgttCTTATTTAATTCAGAAGAAAATCTAGGACTAATTTCAATATTTGGTTACATGCTCTTCCTATTCTACATTGGTGTCAAAACAGATATGAGTGTAGTCCACAAAACTAGAAGTGGTGTCACCAAAATAGGTTTTATTGCTATAATAGCTCCATATCTATGTAGCATGGTTGTTCTAAATTCATATTCATCAAAATACCTACAACCTGAGCAAGTAAGAATCCTCGGAGCTATCATTGGATTGTTTTGTATGGCCCCTTTTCCAGTGATTTCCACAACTTTAAGTGATCTCAAGATTCTCAATTCAGAATTGGGTCGAATCGGTCTATCAGCATCATTAGTTAGTGAGATTTTCAATCTGTTCTTAGCATCATTGATAACATTTTCTAAATTACGCGGAGAGCGTGGTCTAACGAATACTTTGCTTTGTGTTGCCGTCGCTATCTTGTATATACTCTTGGTTATATTCATTATTCGACCCGCGATGTTTTGGATTATAAAACAAACACCGGAAGGTTCACATGTGAGTGATAACTATGTCTATAGTATACTCATTATAACTTTGTTTTCAAGCTATGCTTCATATAGATTTGGATTCTTCCTACTCTTTGGACCATATATATTGGGTTTGGCTATTCCAGAAGGACCTCCATTAGGCACagctattataaaaaaaattgatacttttGTTAATCATATTTTCTTGCCAATGTTTGTGACTACATGTTGTATGAGGGTAGATTTGAAAGACTTGTTGATTTGGAAAGATCAAAGTGACGGTGTTGATTATTTTATGGTGCATACTGTGGTTATTGTTGAAGTCATTACTGTTGCTAAATTTTTTGCTTGTATGATAACTCCTTTAGGCAATGGGATGCCATGGAATGatgttgtttgtttgtctttGATTATGAGTTCCAAAGGCATTGTTGAAATGGCTGCTTTCTCTTCGATCAGAGATTCCAAAGGTCTACCAAATAACATATTTGCATTATTGATGATATGCATCATAGTAAACTCAACATTGATTCCAATGATGTTGCGTTATATGTATGATCCAACAAAGAAATATGCAGGTTACATAAAGAGAAACGTAATAGATCTTAAAAGTAACTCCGAACTTCGAGTTTTAGCATGTATTCATAGACCAGACAACATTCCAGCAACAATAAAGCTTCTAGAAGCAACATATCCAACAAAAGAAGAACCAATATACACTTATGCACTTCAACTCATTGAATTAATAGGAAGAACTTCACCAATTTTCATTTGTCATAATattcaaagaaagaaggaatCAAATTCAAACACATCAATGGCAGAGAAGTTACTAGAATCATTTCAAAGTCTCGAAAGAGAGTTCCAAGATTGTTTAGTTGTCAATGCATTCACAGCTATCTCGCCACCAGAAATGATGTACGACGATATATGTACATTAGCACTCGATAATTTTACATCGCTAATTATTCTTCCTTTTCATCGACAATGGTCTTGCGATGGTAACTCGGTCGAGCTAGAAGATGAGTCATTAAGGGACATAAACTATAGAGTTATGGAAAGAGCTCCATGTTCTGTTGGTGTTTTAATCGAACGATCACAAATGACACATATTTTTTCACCCGAAACACCGTATAATGTGTGTTTGATATTTATAGGTGGGAAAGATGATACAGAAGCACTGTTTTTCACAAAGAGAATGACTAAGAATCCACATGTGAAACTTACCGTGGTTCGATTCTTGTCTTTCGATGATGTTGATGACGATTCGAAGGGAAGTGGTTATGAGGGTTTACTTGATAATGAACTATTGGATGAAATTAAGACAAAGAATAAAATTGGTAATGTTAGTGTTAAATATGTTGAGGAAATAGTGAAAGATGGACCAGAAACAGCATTGATTATAAGGTCTTTGGTCACagaatttgatttgattgttgTTGGGAGGCAATCTAGAGTTGAAACTCCTCAAACTTCTGGATTATTGCAATGGAGTGTGTATCCTGAACTTGGTGTTTTGGGAGATTTGTTGGTTTCTACTGATGCTGGTGGTAAAGCTTCTGTTTTTGTTATACAACAACAAAGAACAGCAATGGAAGTTtaa 2388 0.3388 MSFKRHDTISQFRTCIYLPPRVNSQTPWYGMIETRSFLVYSLPVMEMQMCLIFFGTLFFKSILCRLGIPKFTSMSIVGLIFATTFNKNWTGKMKMLFLFNSEENLGLISIFGYMLFLFYIGVKTDMSVVHKTRSGVTKIGFIAIIAPYLCSMVVLNSYSSKYLQPEQVRILGAIIGLFCMAPFPVISTTLSDLKILNSELGRIGLSASLVSEIFNLFLASLITFSKLRGERGLTNTLLCVAVAILYILLVIFIIRPAMFWIIKQTPEGSHVSDNYVYSILIITLFSSYASYRFGFFLLFGPYILGLAIPEGPPLGTAIIKKIDTFVNHIFLPMFVTTCCMRVDLKDLLIWKDQSDGVDYFMVHTVVIVEVITVAKFFACMITPLGNGMPWNDVVCLSLIMSSKGIVEMAAFSSIRDSKGLPNNIFALLMICIIVNSTLIPMMLRYMYDPTKKYAGYIKRNVIDLKSNSELRVLACIHRPDNIPATIKLLEATYPTKEEPIYTYALQLIELIGRTSPIFICHNIQRKKESNSNTSMAEKLLESFQSLEREFQDCLVVNAFTAISPPEMMYDDICTLALDNFTSLIILPFHRQWSCDGNSVELEDESLRDINYRVMERAPCSVGVLIERSQMTHIFSPETPYNVCLIFIGGKDDTEALFFTKRMTKNPHVKLTVVRFLSFDDVDDDSKGSGYEGLLDNELLDEIKTKNKIGNVSVKYVEEIVKDGPETALIIRSLVTEFDLIVVGRQSRVETPQTSGLLQWSVYPELGVLGDLLVSTDAGGKASVFVIQQQRTAMEV 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03000 795 PANTHER CATION/H + ANTIPORTER 10 792 - -
Tsu06g03000 795 Gene3D - 45 454 IPR038770 -
Tsu06g03000 795 Pfam Sodium/hydrogen exchanger family 50 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu06g03000 795 PANTHER CATION/H(+) ANTIPORTER 4 10 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03000 Tsu-Chr6 39369924 39374397 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03000 37 790 Antiporter Super Family AT5G22900 35.525 1.70e-163 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03000 - - cam:101496863 1182.55