Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02996 ATGTCTTCTAAACAAAATTATACAGTTCAACAATTTAGAACATGTGTATACCTGCCTCCGCGAGTAAATTCACTGACACCATGGTTCGAAATGGCCGATACTCGCTCGTTTTTACTAAGTTCTTTGCCTGTGTTGCAGATGCAGATGTGTTTGATCTTTTTTGGAACTCTTCTCTTGAAATCTATATTATGTCGTTTTGGAATCCCCAAGTTCACTTCTATGAGCATTGTTGGTCTAATCTTTGCAACTACATTCACTAAAAATTGGACCGGAAAAATGAAGATGTTGTTCTACTTTGGTTCACAAGAAAATCTAGGACTAATTTCAATATTTGGTTACACACTTATCCTATTCTACATTGGTGTAAAAACAGATATGAGTGTAGTCCACAAAACTAAAAGTGGTGTCAGCAACATAGCTTCCATTGCTATAATTGCTCCATATCTATGTAGCATGGTTGTTCTAAATGCCTACTCATCAAAATACCTTCAACCTGTGGAAGTAAAAATCCTTGGAGCTATCATTGGATTATTCTGTATGACCCCTTTTCCTGTCATTTCCTCAAATTTAAGTGATCTCAAGATTCTCAATTCAGAATTGGGACGAATCGGTCTATCAGCATCATTAGTTAGTGAGATTTTCAATGTGTTCTTATCATCATTGATAACATTTTCTAAATTAATTGGAGAGCGAGGTCTAACGAATGCTTTGCTTTGTGTTATGGCCGCTGTCTTGTATATACTCTCAGTTATATTCATTATTCGACCTGTGATGTTCTGGATTATAAGACAAACACCTGAAGGTTCGCATGTGAGTGATAACTATGTCTATAGTATACTCATAATAACTTTGTTTTCAGGCTATGCTTCATATAGATTTGGATTCTTTGTACTCTTTGGACCATTTATATTGGGTTTGGCTATTCCAGAAGGACCTCCATTAGGCACCgctattgtcaaaaaaatcgATACTTTTGTTAATGGGATTTTCTTCCCAATTTTTGTGACTACATGTTGTATGAGGGTAGATTTGAACGATTTATTGATTTGGAAAAATCAAAGTGATCAAAGTGTTGATTATTTTATGGTACAAACTTTGGTTATTATTGAAGTCATTGTTGTTACCAAATTTGCTGCTTGTATGATAACTTCTTTACGCAATGGGATGCCATGGAATGATGCTATTTGCTTATCTTTGATTATGAGTTCCAAAGGAATTGTTGAAATGGCTGCTTTCTCTTTGATCAGAGATTCTAAAGGTCTACCAGGTAACATCTTTGCATTAGTGATGATTTGCATCATCGTAAACTCAACATTGATTCCAATGATGTTGCGTTATATGTACGATCCATCAAAGAAATATGTGGGTTACATAAAGAGAAACATAACAGATCTAAAAAGTAACTCAGAACTTCGGGTTTTAGCATGTATTCATAGACCAGAAAACATTCCAGCAACAATAAATCTTCTAGAAGCAACATATCCAACAAAACAAGAACCAATAAGCACTTATGCACTTCAACTCATTGAGTTAGTAGGAAGAGCTTCACCAATTTTCATCTGTCataatcttcaaagaaagatgaaatcaaattcaaacacaTCAATGGCTGATAAGTTACTAGAGTCATTTCAAAGTCTAGAAAGAGAGTTCCAAGATTGTTTAGCTGTTAATGCATTCACAGCTATCTCGCCACAAGAAATGATGTACGAAGATATATGTACATTAGCACTCGATAAGCTTACATCGCTTATTATTCTTCCTTTTCATCGACAATGGTCTTGCGATGGTAACTCAGTCGAGCTAGAAGATGAGTCATTAAGGGACATAAACTATAGAGTTATGGAAAGAGCTCCATGTTCTGTTGGTGTTTTAATCGAACGATCACAAATGACACATATTTTTTCACCCGAAACACCGTATAATGTGTGTTTGATATTTATAGGTGGGAAAGATGATAGAGAAGCACTGTTTTTCACAAAGAGAATGACTAAGAATCCACATGTGAAACTTACCGTGGTTCGATTCTTGTCTTTCGATGATGTTGATGACGATTCGAAGGGAAGTGGTTATGAGGGTTTACTTGATAATGAACTATTGGATGAAATTAAGACAAAGAATAAGATTGGTAATGTTAGTGTTAAATATGTTGAGAAAACGGTGAAAGATGGACCAGAAACAGCATTGATTGTAAGATCTTTGGTCACTGAATTTGATTTAATTGTTGTTGGGAGACAGGCTGGAGTTGAAACCACTCAAACTTCTGGATTGTTACAATGGAGTGAGTATTCTGAACTTGGTGTTTTGGGGGATTTGTTGGTTTCTACTGATGCTGGTGGTAATGCTTCTGTTTTTGTTATACAACAACAAAGAACAACTATGGATGTTTTGTTGTTGCCGGAGTTAAAAccgattaaaaaataa 2424 0.3457 MSSKQNYTVQQFRTCVYLPPRVNSLTPWFEMADTRSFLLSSLPVLQMQMCLIFFGTLLLKSILCRFGIPKFTSMSIVGLIFATTFTKNWTGKMKMLFYFGSQENLGLISIFGYTLILFYIGVKTDMSVVHKTKSGVSNIASIAIIAPYLCSMVVLNAYSSKYLQPVEVKILGAIIGLFCMTPFPVISSNLSDLKILNSELGRIGLSASLVSEIFNVFLSSLITFSKLIGERGLTNALLCVMAAVLYILSVIFIIRPVMFWIIRQTPEGSHVSDNYVYSILIITLFSGYASYRFGFFVLFGPFILGLAIPEGPPLGTAIVKKIDTFVNGIFFPIFVTTCCMRVDLNDLLIWKNQSDQSVDYFMVQTLVIIEVIVVTKFAACMITSLRNGMPWNDAICLSLIMSSKGIVEMAAFSLIRDSKGLPGNIFALVMICIIVNSTLIPMMLRYMYDPSKKYVGYIKRNITDLKSNSELRVLACIHRPENIPATINLLEATYPTKQEPISTYALQLIELVGRASPIFICHNLQRKMKSNSNTSMADKLLESFQSLEREFQDCLAVNAFTAISPQEMMYEDICTLALDKLTSLIILPFHRQWSCDGNSVELEDESLRDINYRVMERAPCSVGVLIERSQMTHIFSPETPYNVCLIFIGGKDDREALFFTKRMTKNPHVKLTVVRFLSFDDVDDDSKGSGYEGLLDNELLDEIKTKNKIGNVSVKYVEKTVKDGPETALIVRSLVTEFDLIVVGRQAGVETTQTSGLLQWSEYSELGVLGDLLVSTDAGGNASVFVIQQQRTTMDVLLLPELKPIKK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02996 807 Pfam Sodium/hydrogen exchanger family 50 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu06g02996 807 PANTHER CATION/H(+) ANTIPORTER 4 10 793 - -
Tsu06g02996 807 PANTHER CATION/H + ANTIPORTER 10 793 - -
Tsu06g02996 807 Gene3D - 45 454 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02996 Tsu-Chr6 39330158 39333129 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02996 15 791 Antiporter Super Family AT5G22900 35.237 2.34e-164 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02996 - - cam:101496863 1196.8