Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02993 ATGTATCGCAACTCAGAAAAATTCAGTTCAGATCAGTTCGTGCCGTTAAAATTGAGAAGCATAGATTGGAAGCCAGACTTAACCTATCTGCCTAGTCCTATTCGGATTGTGGACCGTGATGTAAGATTCTTCGGAACAAGGGAAATTCCGGTAGTGAAAGTAGAATGGCCGCAATCACCGGATGGCGAGTTCACTTGTGATGATGCTATAGGTGTTGGAATTGGAATTTCAGCTCAAAGAGGAAGCAGAAGAAAAGATCAAACATTTATCACTTGTAATGATGAAGGTGCTGTTTACTTGGAAGCCAAGGTAAACCATACCATGGTTGAATTTCTCAATCCACCTAAGCTAGAATTTCTAAATAAATTGCTTCCATGTGAGCCTAATAAGATGCATCGAAATGGAGAAGATTTACCACAAGTTCTTGTACCAGTTAACATGTTCAATTGTGGTGGAATAGCTATAGGTACTTGTAATCTCCATACCCTCCTTGACGGTTGTTCCGGCCGTCTTTTCCAAACTACTTGGGCTGCCATTTGTCGAGGCTGCTCTAGCGCCAAATTACCATGCCCCGATTTCTTTTCTGCTTCTTCTTGCTTTCCAACAATAAATCATGTTGGTAAGAATACTAATGAGGGCTTAGATGGAAAATTGAAGATTGAAATTGAAGATTGA 675 0.4044 MYRNSEKFSSDQFVPLKLRSIDWKPDLTYLPSPIRIVDRDVRFFGTREIPVVKVEWPQSPDGEFTCDDAIGVGIGISAQRGSRRKDQTFITCNDEGAVYLEAKVNHTMVEFLNPPKLEFLNKLLPCEPNKMHRNGEDLPQVLVPVNMFNCGGIAIGTCNLHTLLDGCSGRLFQTTWAAICRGCSSAKLPCPDFFSASSCFPTINHVGKNTNEGLDGKLKIEIED 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02993 224 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 80 216 - -
Tsu06g02993 224 PANTHER F21J9.9 80 216 - -
Tsu06g02993 224 Gene3D - 67 210 IPR023213 -
Tsu06g02993 224 Pfam Transferase family 85 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02993 Tsu-Chr6 39313816 39317615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02993 90 183 Monolignol Biosynthesis Gene Families AT5G48930 29.474 2.84e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02993 - K13065 gmx:102668997 201.445