Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02971 ATGGATGCAACCTCAGAGATCTTTGAACAACCTGACTCTGACGTCCAAAATACCCCTGTTTTAGAGTTTAATGGTGCAAACTTGGACAATCTTGCAGAAAAAGTGAGCAATAATATTAGTGAGgGCACTGAagttgaaaataatgaaaaaataattccaaAGGATGTTGCACAAGATCCAAAGGTCATTGAGGTTAATAATGAAGAAATAACTATAGAGGATGTTGcacaacaaaattcaaatgtcattGAGCATCCTAAAAAATTTCCTCAGATTGGGTTGGAATTTGACTCTCTTGAAGATGTTAAGAATTTCTACAAAGCATTTGCAAAAGAAGAAGGTTTCGGGGTTCGTACACATTCCAGTAAACCAAACTTATGCATACTTGTGTGTTCTAATGTTGGTCAGCGTACAACCGACAATACCAAGAATGAGGAAAGTAATCCACTTAAAAGAAAATCTAGGAGAAGGTGCTCTAGTTCAAGAACTAATTGTATGGCATCACTTACTGCTTCAAAGGCACGAAAGAGACACAGGTGGGCTATCATTGGCTTTAACAATGTCCATAATCATGGTATGGTTAGCCCAAAGAGTGTGCCCTATCTTAGATGTCATAAGAAAATGAGTGCAGCAGCAAAAAGCCTTGTTGAAACATTTGATAAAGAGGGTTTGCCTACCGGAAAAGTTGCTTCAATGTTTAACAATGCAGGTTCAACCTTCTCTAATAGAGATTGTTGGAATCATCTTAGAGATCTTCGATATAGAAATTTAGATGTTGGAGATGCTCAAGTTGTCGTCAACTTTTGCATACAAAAGCAAACTGAGAATCCAAACTTCTTCTATGCAATACAGTGTGATAATGATTCACGAATGATTAACTTTTTTTGGGTAGACGCAAGATCAAGGTTAGCCTATGAAATATTTGGAGATGTTGTAACATTTGATACAACTTATAAGACCAACAAGTATAGTATGCCATTTGCACCATTTACCGGGTTGAATCATCATCACCAGTCTATTTTATTTAGTTGTGCTTTGTTGCAAGATGAAACAGAGAAATCATTTACATGGTTGTTTGAAAATTGGCTTAAAGCAATGGGTGGAAAGAGTCTTGTATCAATAATTACTGATCAAGATTTGGTAATGAAAGTCGCAATATCCAAGGTATTTCCACAAACTCGGCATCAGTTATGTTTATGGCACATTAGGAAGAAATTTCCTGAGAAGCTTTCACACATTTACCATAAAAACTCAACTTTTAAGCGTGATCTAAAAAGGTGTATACGTGATTCATCATGTATAAAAGACTTTGAAGAAGATTGGCATCATATAATGGTTGAATATGATTTGGTGAAAAACGAATGGCTTCAGGATTCTTCAACCACATTGCAAGATTTTGTAGTGAAATTTGACAAAGCTGTCAATAGTCGCTacgagaaagaaaagaaagaagattttGAATCGAGACATCGAGAAAGGATGTTAACtgttggatcaaaaattgaagAGCATGCTGCAACTTTGTATACTAGAGCCATCTTTAATAAATTTCAAGATGAACTAGCAAAGATTTGTCGGTTCACAAAGGAGAAAGTTGAGAAAAGTGGTCTCAATATACATATAAGGCACATCTTGGCAGTTTTTcaagcaaaaaatattattgaaattcCAAGCAAGTATATTTTACATCGTTGGACAAAGGATGCTAATACGAGCTTAGAATTTAGTGTTCGTGAAACAAATTCGGTATGTGATAATGGTAATTCAGCAACCTTACGAAGTATGCAAGTAAGCGGGTTTCCCGATCTTGCTGCAAAATCAGAGAGAGTTTACAATTTTATATCATCAGGGTTGGAAAAATTATACGAAGAGGCAATAAAGATGAATTATGAAATGCAAACTAGTAAGGATGGACTTCTTTCTGAGACAAGTTGTCCGGATATGTTATTCCCAGAGCAAGAAAACGAAGAGGCTAGATTAACTATTAGATCTCCAGTAAAATCACAAACCAAAGGAAGGCAAAAGGATGATGCCAAACTTCCCAAATCTGGAAGAATAAAAAGTAGTCTAGAGTTGTCAATGAATCGACTTGCAGGAAAAAGACGCAATTGTCAATTATGTCAAGAACCTGGTCACAATCGAAGAAGTTGCAAGCTGAAAACAATCGAGGAAGAAGATAACTCATCTAATTAA 2193 0.3434 MDATSEIFEQPDSDVQNTPVLEFNGANLDNLAEKVSNNISEGTEVENNEKIIPKDVAQDPKVIEVNNEEITIEDVAQQNSNVIEHPKKFPQIGLEFDSLEDVKNFYKAFAKEEGFGVRTHSSKPNLCILVCSNVGQRTTDNTKNEESNPLKRKSRRRCSSSRTNCMASLTASKARKRHRWAIIGFNNVHNHGMVSPKSVPYLRCHKKMSAAAKSLVETFDKEGLPTGKVASMFNNAGSTFSNRDCWNHLRDLRYRNLDVGDAQVVVNFCIQKQTENPNFFYAIQCDNDSRMINFFWVDARSRLAYEIFGDVVTFDTTYKTNKYSMPFAPFTGLNHHHQSILFSCALLQDETEKSFTWLFENWLKAMGGKSLVSIITDQDLVMKVAISKVFPQTRHQLCLWHIRKKFPEKLSHIYHKNSTFKRDLKRCIRDSSCIKDFEEDWHHIMVEYDLVKNEWLQDSSTTLQDFVVKFDKAVNSRYEKEKKEDFESRHRERMLTVGSKIEEHAATLYTRAIFNKFQDELAKICRFTKEKVEKSGLNIHIRHILAVFQAKNIIEIPSKYILHRWTKDANTSLEFSVRETNSVCDNGNSATLRSMQVSGFPDLAAKSERVYNFISSGLEKLYEEAIKMNYEMQTSKDGLLSETSCPDMLFPEQENEEARLTIRSPVKSQTKGRQKDDAKLPKSGRIKSSLELSMNRLAGKRRNCQLCQEPGHNRRSCKLKTIEEEDNSSN 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02971 730 Pfam MULE transposase domain 311 405 IPR018289 -
Tsu06g02971 730 MobiDBLite consensus disorder prediction 654 688 - -
Tsu06g02971 730 MobiDBLite consensus disorder prediction 669 684 - -
Tsu06g02971 730 Pfam FAR1 DNA-binding domain 104 194 IPR004330 -
Tsu06g02971 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 459 536 - -
Tsu06g02971 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 90 457 - -
Tsu06g02971 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 541 621 - -
Tsu06g02971 730 MobiDBLite consensus disorder prediction 138 162 - -
Tsu06g02971 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 459 536 IPR031052 GO:0006355
Tsu06g02971 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 541 621 IPR031052 GO:0006355
Tsu06g02971 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 457 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02971 Tsu-Chr6 39080342 39083207 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g02971 MULE 1.7e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02971 - - qlo:115970754 682.945