Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02933 ATGGCGGCAGGACTAACCGCCACTATAACCTTACAACCCTTAAACCGTCACTATAAACCTTTGTTTCCTCTTCTTCAAAAACCAACACCAACACTTATTTTTTCCCCTTTAAGATGTTTTTTACATCAAAGAAAAACCTTAAAATCTCAAAGATTGAAAAACTTCACCCTTTGTGTTCTCATGGAAGACCCAAAACAAGATACCCAAATGGAAATTGAAGCTGAAAAATCACCCCTTTTAGAGAATAACTATGTTCCTCAAATTGTGTCACaaaaaatggaagagaaaatgaaaaggaaaaagtcAGAGAGGTTTACTTATCTTGTTGCAGCTGTTATGTCTAGTCTTGGTATAACATCTATGGCTGTTTTGTCCGTTTATTATAGATTTTCATGGCAAATGGAGGGTAGTGGAGAAATTCCATGGTCAGAAATGTTTGGTACATTTGCTCTATCAGTTGGTGCTGCAGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAAGGCTCTTTGGCATGCTTCCTTATGGCACATGCATGAGTCCCATCATAGAGTAAGAGAAGGAGCTTTTGAGTTGAATGATGTTTTTGCAATAATCAATGCTGTCCCTGCTATCGCTCTCCTTAACTTTGGTTTCTTCCACAAAGGTCTCATCCCTGGTCTTTGCTTCGGTGCGGTAAGTGTCTCTGTTTTTCTTACTTGGCAACTCTTCCGGTGA 717 0.3835 MAAGLTATITLQPLNRHYKPLFPLLQKPTPTLIFSPLRCFLHQRKTLKSQRLKNFTLCVLMEDPKQDTQMEIEAEKSPLLENNYVPQIVSQKMEEKMKRKKSERFTYLVAAVMSSLGITSMAVLSVYYRFSWQMEGSGEIPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRVREGAFELNDVFAIINAVPAIALLNFGFFHKGLIPGLCFGAVSVSVFLTWQLFR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02933 238 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 31 226 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02933 Tsu-Chr6 38585043 38587100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02933 1 229 Chloroplast and Mitochondria Gene Families AT4G25700 56.897 1.50e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02933 K15746 - gmx:100813368 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04377 01 51614758 51617885 Tsu06g02933 06 38585043 38587100 ECH
Tsu06g02933 06 38585043 38587100 Tsu06g02933 06 38585043 38587100 ECH
Tsu06g02933 06 38585043 38587100 Tsu01g04377 01 51614758 51617885 PCT