Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02876 ATGGGATCTGCAAACCAAAACCATCTTAAGGTTAGGAAAAAATTGTCGTCCACTGAATTAGAAAGTGCCCACTTGGGAGACTTTGGCTTAGCTAGACTCATTCATGGAGCCACAAGACATTCAATTAAAGATCAAATGGATTCCTCCACAATTTTGGAAACTATAGGATATACTCCTCCAGGTGGTCCAATATCATCCCAAGGAGATATCTACCGTTTTGGGATTCTTCTATTGGAGTTAGTCACTGGAAAGAGGTCAACAGACAATATGTTTTCTGAAAATCTAAGCATACACAAATTTTGTAAGATGAAAATTCCAGAAGGAATCCTTGAGATAGCAGACCAACGTTTGCTTATCCCATTTGCTGAAGATCAGACAGGAATTGTGGAAAACAAGATTAAGAAGTATTTGGTGATGTTTGCAGGAATTGGAGTTGCATGTTCGGAAGAATTTCCTGATCATCGAATGTTGATAAAAGATGTTATAGTTAAGTTgaatgaaatcaaatcaaagTTTCCATACTAG 525 0.3619 MGSANQNHLKVRKKLSSTELESAHLGDFGLARLIHGATRHSIKDQMDSSTILETIGYTPPGGPISSQGDIYRFGILLLELVTGKRSTDNMFSENLSIHKFCKMKIPEGILEIADQRLLIPFAEDQTGIVENKIKKYLVMFAGIGVACSEEFPDHRMLIKDVIVKLNEIKSKFPY 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02876 174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 173 - -
Tsu06g02876 174 PANTHER LRR RECEPTOR-LIKE KINASE 22 173 - -
Tsu06g02876 174 SUPERFAMILY Protein kinase-like (PK-like) 23 169 IPR011009 -
Tsu06g02876 174 Gene3D Transferase(Phosphotransferase) domain 1 7 170 - -
Tsu06g02876 174 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02876 Tsu-Chr6 37886040 37889010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02876 22 172 Receptor kinase-like Gene Family AT3G47580 38.462 1.46e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu06g02876 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02876 - - mtr:MTR_7g078340 239.58